Gene BamMC406_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3523 
Symbol 
ID6179297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp452423 
End bp452809 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content71% 
IMG OID641683292 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_001810206 
Protein GI172062555 
COG category[R] General function prediction only 
COG ID[COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0522964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAC TCGAAGTTTT CCTGCCGGCC GGCCACGACG ACGCACGAAA GGCCGAGCTG 
ATCGCGCGGC TGTCCGGCGC GACCGTCGAC GCGATCGGCG CGCCGATCGA ATCGGTGCGC
GTGCTGCTCA CCGAATTGCC CCCGACCCAT ATCGGCCTCG GCGGGCGCAC GGCCGCCGAC
GGCGCACCGC CGTCGCTGCC GGTGATCGTC GCGATCCTGA TCGCCGGGCG CACCGACGAA
CAGAAACGCG CGCTGATCGC CGCGCTGTCG GACGCCGGCG CGAACGTGCT CGATGGGCCG
TTGCAGGCGA CCCGCGTCAT CATCAAGGAC ATCCCGAACA CCGACTTCGG GATCGGCGGC
CAGACCGCGC GGGCGCTGGG GCGCTGA
 
Protein sequence
MPTLEVFLPA GHDDARKAEL IARLSGATVD AIGAPIESVR VLLTELPPTH IGLGGRTAAD 
GAPPSLPVIV AILIAGRTDE QKRALIAALS DAGANVLDGP LQATRVIIKD IPNTDFGIGG
QTARALGR