Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3455 |
Symbol | |
ID | 6179302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 375013 |
End bp | 376062 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641683224 |
Product | hypothetical protein |
Protein accession | YP_001810138 |
Protein GI | 172062487 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGTTGC GCTTCTGGAC GCTCGGCGCG GCGCTCGCGG CCACGCTCTT CGCGGCTGCG TTCGCGGCCG GCTATGCGAG CCCGTCGGCG CCGCCCGCCG GCGCCTTCGA CGACGCGAAT CGCGGCCGCC CGCTCGCGCC GCTCGGCTCG GAGCGGCAGT GTGAACGCTA CTCGGGCCTG CCGGCGACGT GGCGTGACGA CCCGAAGGCC GGGATGGTGC ACCTGAGCGG CGGCGCGTTC GTGTTCGGCA GCACGCGCGG TTATGCGGAC GAGCGTCCGG TCGGCGACGG CAGGACGCGC GTCGGCGGCT TCTGGATCGA CCAGACCGAC GTGACGATCG CGCAGTTCGC CGCCTTCGTG AAGGCGACCG GTTACGTGAC CGAGGCCGAG CAGCAGGGCG GCGCGGCGGT GTTTCACGTG CCGACGCGCG ACGAGCTGAA TGCACGTGAC CTTGCGTGGT GGAGCTGGGT GAAGGGCGCG TCGTGGCGGC AGCCGCGCGG CCCGGGCAGC AGCGTCGACG GGCACGGCAA CCTGCCCGTC ACACTCGTCA CGCAGCGCGA CGCACTCGCG TATGCGCACT GGCTCGGCCG CGACCTGCCG ACCGAAGCCG AATGGGAATA CGCGGGCAAG GCCGGTCGCG ACGACGCGTC GCTCGATGCA GCGCCGCGCG ACGCACAGGG CAAGCCGGCC GCGAACTACT GGCAGGGTGC GTTCCCGGTG CTCGATACGG CCGAGGACGG CCATGCGGGC CTGGCGCCGG TCGGCTGCTA CGCGGCGAAC GGCTTCCGTC TGTACGACAT GATCGGCAAC GCGTGGGAAT GGACGAAGGA CGCGTACACG GGCCCGCATC AGTCGCACAC GAACGGCGAC ACGGCGGCCG TGGCGCCACC GACGCGCCGG CACGACACGC CGATGGTGAT CAAGGGCGGC TCGTTCCTGT GCTCGCGCGA TTACTGCGTG CGTTATCGCG CGTCGTCGCG CGAACAGCAG GAAGCCGATC TCGGCGCGTC GCATATCGGA TTCCGTACGA TTCTGAGGGA TGCATCGTGA
|
Protein sequence | MRLRFWTLGA ALAATLFAAA FAAGYASPSA PPAGAFDDAN RGRPLAPLGS ERQCERYSGL PATWRDDPKA GMVHLSGGAF VFGSTRGYAD ERPVGDGRTR VGGFWIDQTD VTIAQFAAFV KATGYVTEAE QQGGAAVFHV PTRDELNARD LAWWSWVKGA SWRQPRGPGS SVDGHGNLPV TLVTQRDALA YAHWLGRDLP TEAEWEYAGK AGRDDASLDA APRDAQGKPA ANYWQGAFPV LDTAEDGHAG LAPVGCYAAN GFRLYDMIGN AWEWTKDAYT GPHQSHTNGD TAAVAPPTRR HDTPMVIKGG SFLCSRDYCV RYRASSREQQ EADLGASHIG FRTILRDAS
|
| |