| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3453 |
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| Symbol | |
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| ID | 6179540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 372187 |
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| End bp | 372906 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683222 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001810136 |
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| Protein GI | 172062485 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCC GCACCTATCT CGTTACCGGC GCGTCGCGCG GCATCGGCTT CGCGACCAGC
ACGCTGCTTG CCCGGCGCGG CCATCGCGTC ATCGGTCTCG CGCGGCATGC GCAAGGCATC
GACTTTCCCG GCGAACTGAT CGCGTGCGAT CTCGCCGATA TCGAACGGAC GGCCACGACG
CTCGCCCGCA TCGGCGCGTC CGACGAGATC GACGGCATCG TGAACAATGC GGGCATCGCG
TTGCCGCAGC CGCTCGGCAA GGTCGATTTC GCATCGCTGC AGGCGGTGTT CGACCTCAAC
GTGCGCGCGG CGATCCAGGT CACGCAGCAT TTCGCCGATG CGATGAAGGC ACGCGGATAT
GGTCGCATCG TCAACGTATG CAGCCGTGCG ATCTTCGGCA GCCTCGATCG CACCGCGTAT
TCGGCCGCGA AAAGCGCGCT CGTCGGTTGC ACGCGGACGT GGGCGCTTGA ACTCGCCGAG
CACGGTGTGA CGGTCAACGC GGTCGCGCCG GGCCCGATCG AGACGGAACT GTTTCGCCAG
ACGCGGCCGG TCGGCAGCGA AGCCGAACGC AAGGTGCTGG CAACGATTCC CGCACGTCGT
CTCGGCACGC CGCACGATGT GGCTGCGGCG ATCGCGTTCC TGCTGTCCGA CGATGCAGCC
TTCGTCACGG GGCAGGTGCT CGCGGTGGAT GGCGGCGGCA GCCTCGGCGG ACGCAGCTGA
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| Protein sequence | MSSRTYLVTG ASRGIGFATS TLLARRGHRV IGLARHAQGI DFPGELIACD LADIERTATT
LARIGASDEI DGIVNNAGIA LPQPLGKVDF ASLQAVFDLN VRAAIQVTQH FADAMKARGY
GRIVNVCSRA IFGSLDRTAY SAAKSALVGC TRTWALELAE HGVTVNAVAP GPIETELFRQ
TRPVGSEAER KVLATIPARR LGTPHDVAAA IAFLLSDDAA FVTGQVLAVD GGGSLGGRS
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