Gene BamMC406_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3448 
Symbol 
ID6180960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp366752 
End bp367543 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID641683217 
Producthypothetical protein 
Protein accessionYP_001810131 
Protein GI172062480 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGTT TGACGAAACG GGTGCTGGTG TCCGCGGCGG TGCTGGGCGG TCTGTTCGGT 
GCGGTCGCGG CGCAGGCTGC GCCGAAGGAG GACCTGAAGG GCACGAACGT CGTGCTGGTG
CACGGCGCGT TCGCCGACGG GTCGAGCTGG AATCGCGTGA TTCCGCTGCT CGAGGCGCGC
GGCCTGCATG TCGTAGCGGT GCAGAATCCG CTCAGCTCGC TCGCCGACGA TGCCGCCGCG
ACGAAGCGCG CGATCGACGA GCAGAAGGGG CCCGTCGTGC TGGTCGGCCA TTCGTGGGCC
GGCGTCGTGA TCAGCGATGC GGGCAACGAC GACAAGGTGA AGTCGCTCGT CTACGTCGCC
GCGTTCGCGC CGGACAACGG CCAGTCGATC GCCGACGTCA CGCAGGGGCT GCCGGCGCCG
GCGTGGGCCG GCGAATTGCG CAAGGACACG GGCGGTTTCG CGACGCTATC GGACAAGGCG
ATCGCGCAGG ATTTCGCGCC GGACCTGTCG CCCGCGCAGC AGCGCGTCGT CGCGGCGACG
CAAGGGCCGT GGTACGGTGG CTGTATTTCG CAGAAGGTCA CGCAGGCCGC GTGGCATGAG
AAGCCGTCGA CGTTCGTCGT CGCGACGCAG GACCGGATGA TCGATCCGAA GCTGCAGGAG
ACGATGGCGA AGCGGATCGG CGCGACGGTC GCGCGGGTGA ACGGCAGCCA CGTCGCGATG
TTGAGCCAGC CGAAGGCCGT GGCCGACGCG ATCATCGCGG CGGCGGAGCG TGCGAAGCAC
GATACGCAGT AA
 
Protein sequence
MVGLTKRVLV SAAVLGGLFG AVAAQAAPKE DLKGTNVVLV HGAFADGSSW NRVIPLLEAR 
GLHVVAVQNP LSSLADDAAA TKRAIDEQKG PVVLVGHSWA GVVISDAGND DKVKSLVYVA
AFAPDNGQSI ADVTQGLPAP AWAGELRKDT GGFATLSDKA IAQDFAPDLS PAQQRVVAAT
QGPWYGGCIS QKVTQAAWHE KPSTFVVATQ DRMIDPKLQE TMAKRIGATV ARVNGSHVAM
LSQPKAVADA IIAAAERAKH DTQ