| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3275 |
|---|
| Symbol | |
|---|
| ID | 6179253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 180855 |
|---|
| End bp | 181634 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641683049 |
|---|
| Product | stationary-phase survival protein SurE |
|---|
| Protein accession | YP_001809963 |
|---|
| Protein GI | 172062312 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAA CCCGCCCGCT GTTCGACCGC GTCCTGCTCA CCAACGACGA CGGATTCGAC
GCCCCCGGCC TTGAAGTGCT CGAACAGGTC GCCACGCAAC TGGCGCGCGA AGTCTGGATC
GTCGCCCCGG CCGAAGACCA GAGCGGCACG TCGCATTCGC TGAGCCTGCA CGAACCGCTG
CGCGTGCATC GCAAGGGCGA GCGCCGCTTC GCCGTGCGCG GCACGCCGGG CGATTGCGTC
GCGATCGCGG TCAGCCACCT GATGAAGGAC GCGCGGCCCG ACTTCGTACT GTCCGGCGTG
AATCGCGGCG CGAACCTCGG CACCGAAACG GTGTTCTCCG GCACCGTCGG CGCGGCGATG
ACGAGCATGC TGGTCGGCGT GCCGGCGATC GCGCTGAGCC AGGCATTCAG CGACCGCAAC
GCGGTGCCGT GGGATACGGC GCGCACGCAC GCGCCGGACG TGATTCGCCG GCTCGTCGCG
GCCGGCTGGG ACCGCGATGC GTGCCTCAAC GTGAATTTCC CGCCGCGGCC GGCCGACGAC
GTGCGCGGCT TGAAGGTGAC GAACCAGGGT GCCGGAACGC TGCAGGGCGT CGACATCGAG
TCGGGACGCG ATCCGCGCGA CATCGAATAT CACTGGCTGA AGCTGACGCG AGCACCCCGC
GACGACGATG CGGATTCGGA AACGGTCGCG CTCGGCGAAG GCTACATCGC GGTCACGCCG
CTGAAGTTCG AACGCACGCA CGATCACGCG CTCGCGCGGC TGCGGGCGAA CCTGGGCTGA
|
|---|
| Protein sequence | MQETRPLFDR VLLTNDDGFD APGLEVLEQV ATQLAREVWI VAPAEDQSGT SHSLSLHEPL
RVHRKGERRF AVRGTPGDCV AIAVSHLMKD ARPDFVLSGV NRGANLGTET VFSGTVGAAM
TSMLVGVPAI ALSQAFSDRN AVPWDTARTH APDVIRRLVA AGWDRDACLN VNFPPRPADD
VRGLKVTNQG AGTLQGVDIE SGRDPRDIEY HWLKLTRAPR DDDADSETVA LGEGYIAVTP
LKFERTHDHA LARLRANLG
|
|---|
| |