| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3249 |
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| Symbol | |
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| ID | 6179275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 155763 |
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| End bp | 157160 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683024 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_001809938 |
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| Protein GI | 172062287 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.277415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC CGACCGCCAC GCCCTTCAGC GCGCTGCCGC TGACGCCCGC CGCGCTCGCG
AACCTCACGC AGCTCGGCTA CGTCGACATG ACGCCGATCC AGGCCGCGAG CCTGCCGATC
GCGCTGGCCG GCCACGACCT GATCGCGCAG GCGAAGACGG GCAGCGGCAA GACCGCCGCG
TTCTCGCTCG CGCTGCTGGC GCGCCTCGAC ACGCGCCGCT TCGACGTGCA GGCGATGGTC
CTGTGCCCGA CGCGCGAGCT CGCCGACCAG GTCGCGCAGG AAGTGCGCCG CCTCGCGCGC
GCCGAGGAGA ACGTGAAGGT GCTGACGCTG TGCGGCGGCA CGCCGATGCG CCCGCAGGCG
CAGAGCCTCG AACACGGCGC GCATATCGTC GTCGGCACGC CCGGCCGCAT CATGGATCAC
CTCGACCGCG GCAACCTGAA GCTCGACGCG CTGAACACGC TCGTGCTCGA CGAAGCAGAC
CGGATGCTCG ACATGGGCTT CTTCGACGAC ATCGCGAAGG TCGCGCGGAT GTGCCCGACG
ACGCGCCAGA CGCTGCTGTT CTCGGCGACC TATCCGGACG GCATCGCGAA GCTGAGCCAG
CAGTTCCTGC GCAATCCGAA GGAAGTGAAG CTCGAGGAGC GCCACGACAA CAGCAAGATC
CGCCAGCGCT TCTACGAAGT GGCGGAAACC GAACGTCTGC ACGCGGTCGG CCAGTTGCTG
AACCACTACC GGCCGGTGAG CACGATCGCG TTCTGCAATA CCAAGCAGCA ATGCCGCGAC
CTGCTCGACG TGCTGCACGC GCAGGGCTTC CACGCGCTCG CGCTGCACGG CGAGCTCGAC
CAGCGCGAGC GCGACCAGGT GCTGATCCAG TTCGCGAACC GCAGCTGCTC GGTGCTGGTT
GCGACCGACG TCGCCGCGCG CGGGCTCGAC ATCGCGCAGC TCGAGGCGGT GATCAACGTC
GACGTGACGC CCGACCCCGA GGTGCACGTG CACCGCATCG GCCGCACCGG CCGCGCGGAT
CAGGAAGGCT GGGCGCTGAG CCTCGCCAGC ATGGACGAGA TGGGTCGCGT GGGCGCGATC
GAGCAGGCGC TGAAGCGCGA AGTCGAATGG CATCCGCTCG CGGAACTGAA GCCGGCCGGC
AACGACACGC TGCTGCCGCC GATGGAAACG CTGCAGATCC TTGGCGGGCG CAAGGACAAG
ATCCGCCCGG GCGACGTGCT TGGCGCGCTC ACCGGCGATG CGGGGTTCGA CGGCAAGCAG
ATCGGCAAGA TCAACGTGAC CGAGTTCTCG ACTTATGTCG CGATCGAGCG CGGCGTCGCG
CGCGATGCGC TGCGCAAGCT CAATGCGGGG AAGATCAAGG GCAAGCGGGT CAAGGTTCGG
TTGATGGACG AGGAGTGA
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| Protein sequence | MTQPTATPFS ALPLTPAALA NLTQLGYVDM TPIQAASLPI ALAGHDLIAQ AKTGSGKTAA
FSLALLARLD TRRFDVQAMV LCPTRELADQ VAQEVRRLAR AEENVKVLTL CGGTPMRPQA
QSLEHGAHIV VGTPGRIMDH LDRGNLKLDA LNTLVLDEAD RMLDMGFFDD IAKVARMCPT
TRQTLLFSAT YPDGIAKLSQ QFLRNPKEVK LEERHDNSKI RQRFYEVAET ERLHAVGQLL
NHYRPVSTIA FCNTKQQCRD LLDVLHAQGF HALALHGELD QRERDQVLIQ FANRSCSVLV
ATDVAARGLD IAQLEAVINV DVTPDPEVHV HRIGRTGRAD QEGWALSLAS MDEMGRVGAI
EQALKREVEW HPLAELKPAG NDTLLPPMET LQILGGRKDK IRPGDVLGAL TGDAGFDGKQ
IGKINVTEFS TYVAIERGVA RDALRKLNAG KIKGKRVKVR LMDEE
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