| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3232 |
|---|
| Symbol | |
|---|
| ID | 6179149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 135344 |
|---|
| End bp | 136183 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641683007 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001809921 |
|---|
| Protein GI | 172062270 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.611643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCGC CTCAAACGAC GGCCGTCCGG TCGGCCATGC ATCCCCTTTC GACCACGCGC
TTGGCTGCGT CCGCGCCCGG CGGCGATTTC GTGCGGCTGC GCGACGTGCA CAAGTCGTAC
GGCCCGAACC TCGTCGTGAT GGACGGCATG AGCCTCGACA TGCGCGCCGA CGACCGGCTC
GTGATCATCG GCCCGAGCGG CAGCGGCAAG AGCTCGCTGC TGCGCGTGAT GATGGGCCTC
GAAGGCATCC AGCGCGGCGA GATCGCGTTC CAGGGCGCGT CGTACATCCG CGGCGGCGAC
GCGCGCGGCG GCTGGCGCAT CGACGCGAAG CTGCAGAAGC AGGTCGGCAT GGTGTTCCAG
CACTACACGC TGTTTCCGCA CCTGTCGGTG CTCGGCAACC TGATCCTCGC GCCGGTGCGC
GTGGGCGGGC TGTCGAAGGC GGAAGCGACC GAGCGCGCAC GCACGTATCT CGCGCGCCTC
GGCCTCGAAA GCAAGCTGCA TGCATATCCG AGCCAGCTCT CCGGCGGCCA GAAACAGCGC
GTGGCGATCG CGCGCGCGCT AATGCTCGAA CCGAAGCTGA TGCTGTTCGA CGAAGTGACG
TCCGCGCTCG ATCCGGAGAT GGTGGTGGAA GTCCAGAACG TGATGCTGCA GCTCGCCGAG
CAGAAGATGG CGATGATCAT CGTCACGCAC GACATGCACT TCGCGCGGGA CATCGCGACG
CGCGTCGTGT TCTGCGCGAA CGGCAAGATC GTCGAGCAAG GCGCGCCGGA TCAGATCTTC
AAGTGTCCGA AGGAAGCGCG CACGCGGGAA TTCCTCGAGA AAGTCCTGCA TCTCGACTGA
|
|---|
| Protein sequence | MLSPQTTAVR SAMHPLSTTR LAASAPGGDF VRLRDVHKSY GPNLVVMDGM SLDMRADDRL
VIIGPSGSGK SSLLRVMMGL EGIQRGEIAF QGASYIRGGD ARGGWRIDAK LQKQVGMVFQ
HYTLFPHLSV LGNLILAPVR VGGLSKAEAT ERARTYLARL GLESKLHAYP SQLSGGQKQR
VAIARALMLE PKLMLFDEVT SALDPEMVVE VQNVMLQLAE QKMAMIIVTH DMHFARDIAT
RVVFCANGKI VEQGAPDQIF KCPKEARTRE FLEKVLHLD
|
|---|
| |