| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3230 |
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| Symbol | |
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| ID | 6180145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 133986 |
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| End bp | 134651 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641683005 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001809919 |
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| Protein GI | 172062268 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.680788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCTCG ATTTTTCCGT CGTCTGGCCG TACTGGCTCG TGCTCGCGAA AGGCCTCGCG
CTGACGCTGG CCTTCACCGT CACGTGCGCG CTCGTCGGCA GCCTGCTCGG CTTCGTGCTG
AGCCTCCTGC GGATGTCGCC GTCGCGCTGG CTGCGCGGGC CCGTTACCGC GTTCGTCGAA
TTCTTCCGCG GCACGCCGCT GCTGATCCAG CTGTTCTGGG TGTTCTTCTG CTTCCCGGTC
GTGCTGCGGC TGCCGATTCC GCCGTACCTG TCGGTGCTGA TCTCGCTGAC GCTGTACATG
GCCGCCATCA CGAGCGAGAC GTTTCGCGGT TCGCTGAAGT CGATCGCCGG CGAGCAGCAC
GACGCGTGCA TCGCGCTCAG CCTTTCGCCG CACGTGAAGA TCGTCTACGT GATCTTTCCG
CAGGCGTTGC TGCGCGCGAT CCCGCCGCTG CTGTCGAACG TCGTGAGCCT GTTCAAGGAA
AGCGCGCTTA TCTCGTCGGT GGGGATCGCC GACCTGATGT TCGTCGGCCA GAACGTGTCG
AACAGCACCG CGCGGCCCGT CGAGTTCCTG ACCACCGTCG CCGTCATCTA TTTCCTCGTC
GCCTTTCCGC TGACCCGCCT GGTCGGCGTA GTGGAGTCCA GGATGCTCAG GCGCTATGCC
TACTAA
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| Protein sequence | MNLDFSVVWP YWLVLAKGLA LTLAFTVTCA LVGSLLGFVL SLLRMSPSRW LRGPVTAFVE
FFRGTPLLIQ LFWVFFCFPV VLRLPIPPYL SVLISLTLYM AAITSETFRG SLKSIAGEQH
DACIALSLSP HVKIVYVIFP QALLRAIPPL LSNVVSLFKE SALISSVGIA DLMFVGQNVS
NSTARPVEFL TTVAVIYFLV AFPLTRLVGV VESRMLRRYA Y
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