| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3212 |
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| Symbol | pdxA |
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| ID | 6179866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 116080 |
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| End bp | 117126 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641682987 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001809901 |
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| Protein GI | 172062250 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.374094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG CCGCTGCCCT GCCCGTCGTC GCGCTGACGC TCGGCGACCC CGCCGGCATC
GGCGCCGAAC TGATCGCGAA ACTGCTCGCG CGGCCCGACG CGACGTCCCG CGCGAACCTC
GTGCTGATCG GCGACCGCTG GCTGTGGGAA GCCGGCCAGC GCGTCGCCGG CGTGACGGTC
GACGTCGAGC CCGTCGAATC GCTCGCCGCC GCGCGCGGTC GGCCGTCCAC CGCGCGCGCC
GCGTTCGTCG CGGTCGACAC GATCGATCCC GCGCAGGTCA CGGTCGGCCA GCCGGGCGCG
GCCGGCGGCC GCTCTACGCT GACGGTGCTC GACCAGTGTC TCGACGCCGC GCTCGCCGGC
GACATCGACG CGATCTGCTT CGCGCCGCTG AACAAGTACG CGATGAAGCT CGGCGGGCTC
AGGCACGACG ACGAGCTGCA CCACTTCGCG GCCACGCTCG GCGTGACCGG CTACTTCTGC
GAATTCAACA CGCTCGGCGA ACTGTGGACC GCGCGCATCT CGTCGCATAT CCCGCTGAAG
GAAGCGGCGG CCCAACTGAG CGTCGAGCGC ATCGAACAGG CATCCGAACT GATCTACCGG
TCGCTGCTCG CGAACGGCGT CGCGACGCCG AAGGTCGCGA TCGCCGCGTT CAACCCGCAC
GGCGGCGACG GCGGCAGCTG CGGCCGCGAG GAAGTCGACA TCATCGAGCC GGCGGTCCGC
AAGCTGCAGT CGCGCGACTG GCCGACCGAC GCGCCGTTCC ACGGCCCGTT CCCCGCCGAC
ACGATCTTCC TGAAGGCGCA GGCCGGCGAC TACCAGGCGA TCGTCACGAT GTACCACGAC
CAGGGGCAGA TCGCGATCAA GCTGCTCGGC TTCTCGCGCG GCGTGACCGT GCAGGGCGGC
CTGCCCGTAC CGATCACGAC GCCGGCACAC GGCACCGCCT ACGACATCGC GGGGCGCGGC
ACGGCCGACG TCGGCGCGAC CTGGCAGGCG CTGCAGATCG CATGCCGGAT GGGCGCCGCG
CGCCGCACGC CCACCGTTTC GGCGTGA
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| Protein sequence | MTTAAALPVV ALTLGDPAGI GAELIAKLLA RPDATSRANL VLIGDRWLWE AGQRVAGVTV
DVEPVESLAA ARGRPSTARA AFVAVDTIDP AQVTVGQPGA AGGRSTLTVL DQCLDAALAG
DIDAICFAPL NKYAMKLGGL RHDDELHHFA ATLGVTGYFC EFNTLGELWT ARISSHIPLK
EAAAQLSVER IEQASELIYR SLLANGVATP KVAIAAFNPH GGDGGSCGRE EVDIIEPAVR
KLQSRDWPTD APFHGPFPAD TIFLKAQAGD YQAIVTMYHD QGQIAIKLLG FSRGVTVQGG
LPVPITTPAH GTAYDIAGRG TADVGATWQA LQIACRMGAA RRTPTVSA
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