| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3196 |
|---|
| Symbol | |
|---|
| ID | 6179606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 96541 |
|---|
| End bp | 97320 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641682971 |
|---|
| Product | PGAP1 family protein |
|---|
| Protein accession | YP_001809885 |
|---|
| Protein GI | 172062234 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGG AGCATTATCG TGTGCGCATC AAGGTCGAGA ACGGCTACCT CGACGGTACC
GTGCTCGCGC CGAAGACTAC CGTGGCGGGC GTTCTGTTCG TGCACGGCTG GGGCGGAAGC
CAGGAGCAGT ATCTCGAGCG GGCGCGGCAG GCGGCGGCGC TCGGGTGCGT CTGTCTGACG
TTCGATCTGA CCGGGCATGG ACGTACGCTG GAAGAGCAGC AAAACGTGAC GCGCGAAACC
CATCTTCGCG ATTTGCTCGC CGCTTACGAC ACGCTCGTCG ACCACCCGTT GATCGATCGC
GATGCCATCG CCGTGGTCGG CAGCAGCTAT GGCGGCTATC TCGCGACCAT CCTGACCGAA
CTGCGCCCCG TACGCTGGCT CGGCCTGCGC GTACCGGCGC TCTATCTCGA CGACGGCTGG
AATACGCCGA AGCGGGCGCT GCACGTCGAG CACGATCTCG TCGCGTATCG CAAACGCATC
GTGCCGGCGT CCGACAATCG CGCACTGCGC GCGGCGTCCC GCTTTCGCGG CGACGTGTTG
CTCGTCGAAT CGGAGCACGA TCAGATCGTG CCGCACACGG CGATCGCCAG CTATCTGCAG
GCATGCCTGT CCGCGCATTC GCTGACGTAC CGGATTCTCG AAGGCGCCGA TCACGGGCTC
TCGGACGCTG CCAGCCAGAG TGCGTACACC GCCCTCGTCG AGAAGTGGTT GGTCGAGATG
ATCACGGGTC AGCGCGCGGG TGTGCGTGGA TCCGCCGCAC CCGGCCCGAC GGACGCGTAG
|
|---|
| Protein sequence | MTAEHYRVRI KVENGYLDGT VLAPKTTVAG VLFVHGWGGS QEQYLERARQ AAALGCVCLT
FDLTGHGRTL EEQQNVTRET HLRDLLAAYD TLVDHPLIDR DAIAVVGSSY GGYLATILTE
LRPVRWLGLR VPALYLDDGW NTPKRALHVE HDLVAYRKRI VPASDNRALR AASRFRGDVL
LVESEHDQIV PHTAIASYLQ ACLSAHSLTY RILEGADHGL SDAASQSAYT ALVEKWLVEM
ITGQRAGVRG SAAPGPTDA
|
|---|
| |