| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3124 |
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| Symbol | |
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| ID | 6180062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 19912 |
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| End bp | 21129 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682900 |
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| Product | patatin |
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| Protein accession | YP_001809814 |
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| Protein GI | 172062163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC ACGCGCGTAC AGAAAAGCAG GCCGTCGATG CGGCGGACCT GCAACACGAG
GCCGGCGCAC CGGCCGCTGC GCGGTCGCTG CCATATGAAA CGATCGCGCT CGTCCTGCAA
GGCGGCGGCG CGCTCGGCGC GTATCAGGCC GGCGTGTTCG AAGGGCTGCA CGAAGCGAAC
GTTCCGCTCG ACTGGATCGC AGGCATCTCG ATCGGCGCGC TCAACACCGC GCTGATCGCC
GGCAATGCGC CCGAACATCG CGTCGAGCGG CTGCGCGAAT TCTGGGAAAC GATCTGCCAG
CCGGCGTTCT TTCCCGCGAT TCCGGCCGCG TTCGAATTTG CGCTGTTCAA CAGCATCGAC
CAGATCCGCA CGTTCTTCAC CGCATCGCAG GCCGCGAGCG CGATGATGCA GGGCCAGCAG
GGATTCTTCG TGCCGCGCTT CCCGCCGCCG CTGCCGGGCG TGTCCGATCA TCCGGAAAAG
ATCAGCTGGT ACGACACGTC GGCGCTGCGC GCGACGCTGC TGAAGCTGTG CGATTTCGAC
CGGATCAACT CGGGCGAGAC GCGCGTGTCG GTCGGCGCGG TCAACGTCGG CACCGGCAAC
TTCGTGTACT TCGACAACTC GCGTATTCGC CTCACGCCCG AGCACTTCAT GGCATCCGGC
GCGCTGCCGC CCGCGTTCCC GCCCGTCGAG ATCGACGGCG AGTACTACTG GGACGGCGGC
GTCGTGTCGA ACACGCCGCT GATGGAAGTG CTGCGCGCGC GCCCGCGCCG CGACACGCTC
GCGTTCCAGG TCGATCTGTG GAGCGCGCGC GGGCCGCTGC CGCGCACGAT GGCCGATGTC
GCGGAACGCA CGAAGGACGT GCAGTATTCG AGCCGCACGC GTTTCGTCAC CGACACGCTG
CAGCGCGAAC AGCGCTACCG CAACGTGCTG CGCCACGTGC TCGAGCAGGT GCCGGAAGAG
CAGCGCAAGA ACGACCCGTG GTGCGTCGAG GCTGAAGCGA TGTCGAGCGG GAAGAAGTAC
AACATCCAGC ATCTGATCTA TCAGCAGAAG GCATACGAGC ACCACTACAA GGACTATCAG
TTCGGTCTGT CGACGATGCG CGACCACTGG TCCGCCGGTC TCGATGACAT CCGCAAGACG
CTCGCGGTGA AGGACGGCCT CGCGCTGCCC GTCAACGACG CGGGCTTCGT CACGCACGAC
ATTCACCGCC GCCGGTAA
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| Protein sequence | MKPHARTEKQ AVDAADLQHE AGAPAAARSL PYETIALVLQ GGGALGAYQA GVFEGLHEAN
VPLDWIAGIS IGALNTALIA GNAPEHRVER LREFWETICQ PAFFPAIPAA FEFALFNSID
QIRTFFTASQ AASAMMQGQQ GFFVPRFPPP LPGVSDHPEK ISWYDTSALR ATLLKLCDFD
RINSGETRVS VGAVNVGTGN FVYFDNSRIR LTPEHFMASG ALPPAFPPVE IDGEYYWDGG
VVSNTPLMEV LRARPRRDTL AFQVDLWSAR GPLPRTMADV AERTKDVQYS SRTRFVTDTL
QREQRYRNVL RHVLEQVPEE QRKNDPWCVE AEAMSSGKKY NIQHLIYQQK AYEHHYKDYQ
FGLSTMRDHW SAGLDDIRKT LAVKDGLALP VNDAGFVTHD IHRRR
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