Gene BamMC406_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3075 
Symbol 
ID6178087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3415226 
End bp3416029 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID641682853 
Productalpha/beta hydrolase fold 
Protein accessionYP_001809767 
Protein GI172062115 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.260909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC TCGCCAATCG CTTCAATTTC GAAGGTCACC GGATCGCTTG GGGCACGCTC 
GGCGAAGGGC CGCCGCTCGT GCTTGTGCAC GGCACGCCGT TTTCATCGCA GGTGTGGCGC
CGGATCGCGC CGTGGCTCGC GCGGCGCCAT CGCGTGTTCT TCTACGACCT GCTCGGCTAC
GGCCAGTCCG ACATGCCCGA CGCGGACGTA TCGCTCGGCC GGCAGAACGT GTTGTTCGGC
GCGCTGCTCG ACGAATGGAA GATTTCGCGC CCGCGCGTGC TGGCGCACGA CTACGGCGGC
GCGACGGTGC TGCGCGCGCA TTTCCTCGAC GGCATCGCGT ATTCCGACCT GACGCTCGTG
AATCCCGTCG CGATCGCGCC GCAGGGCTCG CCGTTCGTGC GGCATGTCGC GCAGCACGAG
GCCGCGTTCA CCGGGTTGCC GGCCTACGCG CATCACGCGC TCGTGTCGGC CTATATCGGC
CAAGCGGTCG CGCAGCCGTT GAGCGACGAC GTGCTGTCGA TCTACCGCGC GCCATGGCTC
ACGCCCGCGG GCCAGGCCGC GTTCTATCGG CAAATCGCGC AGATGCGCCA GCGCTACATC
GAGGATGCGG AGGCACGCTA CGCGCCGCCG GACTTTCCGG TGCGCATCGT CTGGGGCGAG
GACGACCGGT GGATTCCGCT CGAACAGGGG CAGGCGCTGG CCGATCGCAT CGCGAACGGC
AAGCTGATCA GGGTGCCGCG CGCCGGTCAC CTGGTCCAGG AAGATGCGCC GGAGGCGATC
GTCGCCGCCG TGCTCGACCG GTAG
 
Protein sequence
MLDLANRFNF EGHRIAWGTL GEGPPLVLVH GTPFSSQVWR RIAPWLARRH RVFFYDLLGY 
GQSDMPDADV SLGRQNVLFG ALLDEWKISR PRVLAHDYGG ATVLRAHFLD GIAYSDLTLV
NPVAIAPQGS PFVRHVAQHE AAFTGLPAYA HHALVSAYIG QAVAQPLSDD VLSIYRAPWL
TPAGQAAFYR QIAQMRQRYI EDAEARYAPP DFPVRIVWGE DDRWIPLEQG QALADRIANG
KLIRVPRAGH LVQEDAPEAI VAAVLDR