| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2988 |
|---|
| Symbol | |
|---|
| ID | 6176425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3309942 |
|---|
| End bp | 3310985 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641682764 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_001809680 |
|---|
| Protein GI | 172062028 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.378193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0349212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATG AAGCAGCTTC CGAACGTTAT GCCGACATGC AATACCGCAC CTGCGGCAAA
TCCGGGCTCA AACTGCCCGC CCTGTCGCTC GGCCTGTGGC ACAACTTCGG CGACTCGACG
CCGATCGACA CGCAGCGCGA CATCCTGCGC ACCGCGTTCG ACCTCGGCAT CAATCACTTC
GACCTGGCGA ACAACTACGG GCCGCCGTAC GGCAGCGCCG AAACCAATTT TGGCCGCCTG
CTGAAGGAAG ATTTCCGGCC GTACCGCGAC GAACTGCTGA TCTCGACGAA GGCCGGCTGG
GACATGTGGC CGGGGCCGTA CGGCAGCGGT GGCGGGTCGC GCAAGTACGT GCTCGCGAGC
CTCGACCAGA GCCTGCAGCG AATGGGCCTC GACTACGTCG ACATCTTCTA TTCGCATCGC
TTCGACGCGC ACACGCCGCT CGAGGAAACG GCCGGCGCGC TCGCGTCGGC CGTGCGGCAG
GGCAAGGCGC TGTACATCGG CATCTCGTCG TACTCGGCCG CGAAGACGCG CGAGATGGCC
GAACTGCTCG CGCAATACCA GGTGCCGCTG CTGATCCACC AGCCTTCGTA CAACATGCTG
AACCGCTGGA TCGAGCAGGA TCTGCTCGGG ACGCTCGACG AGATCGGCAC GGGCAGCATC
GCGTTCACGC CGCTCGCGCA GGGGCTGCTG ACGTCGAAGT ACCTGAACGG CGTGCCGGCC
GATGCGCGGG TCAACAAGCC GGGCGGCGGT TCGCTGAAAC AGGATCACCT GAGCGCGGAC
AACCTCGAGC ACGTGCGCAA GCTCAACGGC ATCGCGCAGC GGCGCGGACA AAGCCTCGCG
CAGATGGCGC TCGCGTGGGT GTTGCGCAAT GGCCGCGTGA CGTCGGCGCT GATCGGCGCG
AGCCGTGCGG AGCAGGTGCG TGAAAACGTC GGCGCGCTGA AGAACCTCGA ATTCTCGGCC
GACGAACTCG CGGAGATCGA TCGTCATGCG ACCGAAGGCG GCATCAATCT GTGGGAAAAG
CCGTCCACCG ATCAGGCGAT CTGA
|
|---|
| Protein sequence | MAYEAASERY ADMQYRTCGK SGLKLPALSL GLWHNFGDST PIDTQRDILR TAFDLGINHF
DLANNYGPPY GSAETNFGRL LKEDFRPYRD ELLISTKAGW DMWPGPYGSG GGSRKYVLAS
LDQSLQRMGL DYVDIFYSHR FDAHTPLEET AGALASAVRQ GKALYIGISS YSAAKTREMA
ELLAQYQVPL LIHQPSYNML NRWIEQDLLG TLDEIGTGSI AFTPLAQGLL TSKYLNGVPA
DARVNKPGGG SLKQDHLSAD NLEHVRKLNG IAQRRGQSLA QMALAWVLRN GRVTSALIGA
SRAEQVRENV GALKNLEFSA DELAEIDRHA TEGGINLWEK PSTDQAI
|
|---|
| |