| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2981 |
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| Symbol | |
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| ID | 6177294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3302557 |
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| End bp | 3304197 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682757 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001809673 |
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| Protein GI | 172062021 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.344578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATACG ACTACATCAT CGTTGGCGGC GGATCGGGCG GCTCGAGCGT CGCCAGCCGC
CTCGCCGATG CATGCCCCGA CGCGACGATC GCGCTGATCG AGGCCGGCCC GCACACGGAG
CGCAACCTGC TCGTCAACAT GCCGGTGGGG ATCGCCGCGC TCGTGCCGTT CAAGCTCGGC
ACGAACTACG GTTACGAGAC GGTGCCGCAG CCGGGCCTCG GCGGCCGTCG TGGCTACCAG
CCGCGCGGGC GCGGAATGGG CGGCTCGAGC GCGATCAACG CGATGATCTA CACGCGCGGC
CATCCGGGCG ACTACGACGA GTGGGCCCAG CTCGGCGCAA CGGGCTGGGG CTGGCAGGAC
GTGCTGCCGT ATTTCCGCCG CGCGGAAGGC AACGAGCGCG GCGCCGATGC ATGGCACGGC
GCGGACGGCC CGTTGACGGT GTCCGATCTG CGCTTTCGCA ATCCGTTCTC CGAACGATTC
ATCCAGGCCG CGCACGCGGC CGGCTATCCG CTGAACAACG ATTTCAACGG CGCGACGCAG
GAAGGCGTCG GCTTCTATCA GGTCACGCAT CGCGACGGCT CGCGCTGCAG CGTCGCGCGT
GCGTATATCT ATGGCCGCAA CCGGCCGAAC CTGCATGTGA TTACCGATGC GACGGTGCTG
CGCGTGGGCT TCGACGGCAA GCGCGCGGTC GGCGTCGTGG TGTCGCGCGA CGGGCGCGTC
GAGACGCTCG GCGCGCGGGC GGAGGTGATC CTGTCGGCCG GCGCGTTCAA TTCGCCGCAG
CTGCTGATGT GCTCGGGGAT CGGTCCGGCG GAGCAGCTGC GCCGGCACGG GATCGCGATC
GTGCAGGACG CGCCGGACGT CGGCGCCAAC CTGATCGACC ATATCGACTT CATCATCAAC
ACGCGCGTGA ATTCATCGGA GCTGGTCGGC ATCTGCCTGC GCGGCCTCGC GAAAATGACG
CCGGCGCTCG CGCGCTATTT CTCGAGCCGC ACGGGGATGA TGACGAGCAA CGTCGCGGAG
GCCGGCGGCT TCATCAAGAG CGATCCGTCG CTCGCCCGCC CGGACCTGCA GCTGCATTTC
TGCACGGCGC TGGTCGACGA CCACAACCGC AAGATGCACT GGGGCTTCGG CTATTCGCTG
CACGTGTGCG CGCTGCGCCC GTTCAGCCGT GGCACGGTCG CCCTCGCGAG CGGCGATGCG
CGCGACGCGC CGCTGATCGA TCCGCGCTTC TTCAGCGATA CGCGCGATCT CGATCTGCTC
GTGCGCGGTG CGCAGGCAAT GCGCCGGATC CTGTCGCAGG CGCCGCTCGC GTCGCAAGGC
GGGCGCGAGC TGTACACGCG GGCGGACCAG AGCGAAGCCG AGCTGCGCGC GACGATCGTC
GCGCACGCCG ACACGATCTA TCACCCGGTC GGCACCTGCC GGATGGGTTC GGATGCGCGT
GCGGTCGTGG ATCCGCAACT GCGCGTGCGA GGTGTCGACG GGCTGCGGGT GGTGGACGCT
TCGGTGATGC CGACGCTGAT CGGCGGGAAC ACGAATGCGC CGTCGGTGAT GATCGGCGAA
CGCGCGGCGG ACTTCATCGT CGCGACGCGC AAGGGCGCGG TGCCGCGCGG CGAGGCGGCC
GCGGCGGTGC ACGGCCGCTG A
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| Protein sequence | MQYDYIIVGG GSGGSSVASR LADACPDATI ALIEAGPHTE RNLLVNMPVG IAALVPFKLG
TNYGYETVPQ PGLGGRRGYQ PRGRGMGGSS AINAMIYTRG HPGDYDEWAQ LGATGWGWQD
VLPYFRRAEG NERGADAWHG ADGPLTVSDL RFRNPFSERF IQAAHAAGYP LNNDFNGATQ
EGVGFYQVTH RDGSRCSVAR AYIYGRNRPN LHVITDATVL RVGFDGKRAV GVVVSRDGRV
ETLGARAEVI LSAGAFNSPQ LLMCSGIGPA EQLRRHGIAI VQDAPDVGAN LIDHIDFIIN
TRVNSSELVG ICLRGLAKMT PALARYFSSR TGMMTSNVAE AGGFIKSDPS LARPDLQLHF
CTALVDDHNR KMHWGFGYSL HVCALRPFSR GTVALASGDA RDAPLIDPRF FSDTRDLDLL
VRGAQAMRRI LSQAPLASQG GRELYTRADQ SEAELRATIV AHADTIYHPV GTCRMGSDAR
AVVDPQLRVR GVDGLRVVDA SVMPTLIGGN TNAPSVMIGE RAADFIVATR KGAVPRGEAA
AAVHGR
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