| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2979 |
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| Symbol | |
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| ID | 6176484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3300666 |
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| End bp | 3301124 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682755 |
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| Product | flagellar export protein FliJ |
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| Protein accession | YP_001809671 |
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| Protein GI | 172062019 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2882] Flagellar biosynthesis chaperone |
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| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.470208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.581317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACACG GCTTTCCCCT TCAACTGCTG CTCGACCGCG CGCAGGAAGA TCTCGACACG
GCCACGAAGC AGCTCGGCAC CGCGCAGCGC GACCGCACCG CGGCCGCCGA ACAGCTCGAC
GCGCTGCTGC GCTATCGCGA CGAATACCAC GCGCGCTTTT CGCAGTCCGC TCAGCACGGG
ATGCCGGCCG GCAACTGGCG CAATTTCCAG GCGTTCATCG ATACGCTCGA CGCGGCGATC
GCGCAGCAGC GCAACGTGCT GGCCGCGGCC GAACTGCGCA TCGACGAGGC GCGCCCGAAC
TGGCAACAGA AGAAACGCAC CGTCGGTTCA TACGAAACCC TGCAGGCGCG CGGCGTCGCG
CAGGAAACGC AGCGTGCCGC GAAGCGCGAA CAGCGCGACG CGGACGAACA CGCCGCGAAG
ATTCTGCGCA TGCGGGCCGA CGCGGCCCGC TCGGCGTAA
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| Protein sequence | MAHGFPLQLL LDRAQEDLDT ATKQLGTAQR DRTAAAEQLD ALLRYRDEYH ARFSQSAQHG
MPAGNWRNFQ AFIDTLDAAI AQQRNVLAAA ELRIDEARPN WQQKKRTVGS YETLQARGVA
QETQRAAKRE QRDADEHAAK ILRMRADAAR SA
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