| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2952 |
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| Symbol | dppF |
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| ID | 6178644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3272912 |
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| End bp | 3273928 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682728 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_001809644 |
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| Protein GI | 172061992 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.629819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAG TCCACGAAAC GCGTGCGCCG CACGACGACG AGGAAGCGGT GCTGATCGCT
GACGGCCTCG CGAAGCACTA CTCGGTGAAG CGCGGGATGT TCGGCCAGGG CACCGTGAAG
GCGCTGAACG GCGTGTCGTT CACGCTCAAG CGCGGCAAGA CGCTCGCGGT CGTCGGCGAG
TCGGGCTGCG GGAAATCGAC GCTCGCGCGC CAGCTCACGA TGATCGAGAC GCCCACCGCG
GGCAGCCTGG TGATCGACGG CAAGAACGTG GCCGGCGCGA ACCGCGAGAC GGTCGCCGAC
CTGCGCCGGC GCGTGCAGAT GGTGTTCCAG AATCCGTTCG CGTCGCTGAA CCCGCGCAAG
ACCGTCGAGC AGACGCTCGG CGAGCCGCTC GAGATCAACG CGAACCTGAC GGCCGCCGAA
CGCGCGGCGC GCATCGCGCA GATCATGCGC ACGGTCGGCC TGCGGCCCGA GCACGCGAAG
CGCTATCCGC ACATGTTCTC CGGCGGCCAG CGCCAGCGCG TCGCGATCGC GCGCGCGATG
ATCCTCGATC CGCGCATCGT CGTCGCCGAC GAGCCGGTGT CCGCGCTCGA CGTGTCGATC
CAGGCGCAGA TCCTGAACCT GTTCATGGAT CTGCAGGAGC AGTTCAAGAC CAGCTACGTG
TTCATCTCGC ACAACCTGGC GGTGGTCGAG CACGTCGCGG ACGACGTGAT GGTGATGTAC
TTCGGCAGCG TCGCCGAGCT CGGCGACAAG GCGACGATCT ACGCGCGGCC GCGGCATCCG
TACACGCGCG CGCTGATGTC GGCGACGCCG GCGATCTTCG AGGAAGACCG CCGCGTGCAG
ATCAAGCTGC AAGGCGAGCT GCCGTCGCCG CTCAATCCGC CGTCGGGCTG CGCGTTTCAC
CAGCGCTGCC CGTACGCGAT CGAGCGGTGC CGTGTCGAGG AACCGCAGTT GCGCGACGTC
GACGGACGCC GTGTGGCCTG CCATCGCGCC GAGGAGGTGG GGGAGGCGAA TGCCTGA
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| Protein sequence | MNAVHETRAP HDDEEAVLIA DGLAKHYSVK RGMFGQGTVK ALNGVSFTLK RGKTLAVVGE
SGCGKSTLAR QLTMIETPTA GSLVIDGKNV AGANRETVAD LRRRVQMVFQ NPFASLNPRK
TVEQTLGEPL EINANLTAAE RAARIAQIMR TVGLRPEHAK RYPHMFSGGQ RQRVAIARAM
ILDPRIVVAD EPVSALDVSI QAQILNLFMD LQEQFKTSYV FISHNLAVVE HVADDVMVMY
FGSVAELGDK ATIYARPRHP YTRALMSATP AIFEEDRRVQ IKLQGELPSP LNPPSGCAFH
QRCPYAIERC RVEEPQLRDV DGRRVACHRA EEVGEANA
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