Gene BamMC406_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2938 
Symbol 
ID6178389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3258494 
End bp3258934 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content70% 
IMG OID641682714 
ProductFlgN family protein 
Protein accessionYP_001809630 
Protein GI172061978 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.04442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.386188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAAG AGCTGCTGGC CACGGTCAAC GACGAACACG CGACGGTCGA AGCGTTCGCG 
TCCCTGCTCG CCTACGAGGA AAAGGCGCTC ACGACGCCGG AGCCGCTCGA CATGCTGCCC
GGCATCGTCG AGAAGAAGAG CGTGCTGATC GACCGGCTCG CGCAGCTCGA GCGCACGCGC
GACACGCAGC TGTCCGCGCT CGGCTTTCCG GCCGGCAAGA AAGGCATGGA CCAGGCCGCC
GAGCGCGATG CACGCCTCGC CGGCCGCTGG CAACTCCTGC TGCAGGCCGC CGAACGCGCG
CGCCAGGCCA ATGCGACCAA CGGGATGCTG ATCCGGATCC GGATGGACTA CAACGAGCGC
GCGCTCGCGG TGCTGCGCTC GGCTCCCGCG CCGGCCGGCG TGTACGGGCC CGACGGACGC
GTATCGGCGC TGATGCGCTG A
 
Protein sequence
MREELLATVN DEHATVEAFA SLLAYEEKAL TTPEPLDMLP GIVEKKSVLI DRLAQLERTR 
DTQLSALGFP AGKKGMDQAA ERDARLAGRW QLLLQAAERA RQANATNGML IRIRMDYNER
ALAVLRSAPA PAGVYGPDGR VSALMR