Gene BamMC406_2891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2891 
Symbol 
ID6178035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3211286 
End bp3212647 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content69% 
IMG OID641682667 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_001809583 
Protein GI172061931 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.956659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG TGATTTTGGC GGCAGGCACC GGCAAGCGCA TGCGTTCCGC GCTGCCGAAA 
GTGCTCCATC CCCTGGCCGG CAGGCCGCTC CTCTCCCACG TCATCGCCAC CGCGCGCACG
CTGCAGCCGT CGCGGCTCGT CGTCGTCGTC GGGCATGGCG CCGAGCAGGT CCAGACCGCC
GTCGCCGCGC CCGACGTCCA GTTCGCGGTG CAGGCCGAGC AGCTCGGCAC CGGCCATGCG
GTGCGCCAGG CGCTGCCGCT GCTCGATCCC GCGCAACCGA CGCTGGTGCT GTACGGCGAC
GTGCCGCTCA CCCGCGCGTC GACGCTGCGG CGTCTGGTCG ACGCCGCGCG CGAAGGCAGC
TACGGGATTC TGACCGTCAC GCTCGACGAT CCCACCGGCT ACGGCCGCAT CGTGCGCGAC
GCGGCCGGCT TCGTCACGCG CATCGTCGAG CAGAAGGATG CGTCTCCCGA ACAGCTGAAG
ATCGCCGAGA TCAACACCGG CATCATCGTC ACGCCCACGG GCCAGCTGGC GATGTGGCTC
GGCGCGCTGA AGAACGAGAA CGCGCAGGGC GAGTACTACC TGACCGACGT CGTCGAACTC
GCGATCGAGG CCGGCTTCGA CGTCGTCACG TCGCAGCCCG ACGACGAATG GGAAACGCTC
GGCGTGAACA GCAAGGCGCA GCTCGCGGAG CTCGAGCGCA TCCATCAGCG CACCATCGCC
GATGCGCTGC TCGTCGACGG CGTCACGCTC GCAGATCCCG CGCGCGTCGA CGTGCGCGGC
ACGCTGCGCT GCGGCCGCGA CGTGTCGATC GACGTGAACT GCGTGTTCGA AGGCAACGTG
ACGCTCGCCG ACAACGTGAC GATCGGCCCG AACTGCGTGA TCCGCAACGC GTCGGTCGGC
GCCGGCACGC GCATCGACGC TTTCACGCAC ATCGACGGCG CCGAGCTCGG CGCGAACACC
GTGATCGGCC CGTACGCGCG GCTGCGCCCG GGCGCGCAGC TCGCGGACGA AGCGCATGTC
GGCAACTTCG TCGAGGTGAA GAACGCGGTG ATCGGCCACG GTTCGAAGGC GAACCACCTG
ACGTACATCG GCGACGCCGA CATCGGCGCG CGCGTGAACA TCGGCGCGGG CACGATCACC
TGCAACTACG ACGGTGCGAA CAAGTTCCGC ACCGTGATCG AGGACGACGT GTTCGTCGGC
TCGGACACGC AACTGGTCGC GCCGGTGCGC GTCGGCCGCG GCGTGACGAT CGCGGCCGGC
ACGACGATCT GGAAGGACGT CGCCGAGGGC GTCCTTGCAT TGAACGAGAA GACGCAGACC
GCGAAGAGCG GCTACGTCCG CCCGGTCAAG AAGAAGAGTT GA
 
Protein sequence
MNIVILAAGT GKRMRSALPK VLHPLAGRPL LSHVIATART LQPSRLVVVV GHGAEQVQTA 
VAAPDVQFAV QAEQLGTGHA VRQALPLLDP AQPTLVLYGD VPLTRASTLR RLVDAAREGS
YGILTVTLDD PTGYGRIVRD AAGFVTRIVE QKDASPEQLK IAEINTGIIV TPTGQLAMWL
GALKNENAQG EYYLTDVVEL AIEAGFDVVT SQPDDEWETL GVNSKAQLAE LERIHQRTIA
DALLVDGVTL ADPARVDVRG TLRCGRDVSI DVNCVFEGNV TLADNVTIGP NCVIRNASVG
AGTRIDAFTH IDGAELGANT VIGPYARLRP GAQLADEAHV GNFVEVKNAV IGHGSKANHL
TYIGDADIGA RVNIGAGTIT CNYDGANKFR TVIEDDVFVG SDTQLVAPVR VGRGVTIAAG
TTIWKDVAEG VLALNEKTQT AKSGYVRPVK KKS