| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2829 |
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| Symbol | |
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| ID | 6177562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3134283 |
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| End bp | 3137000 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682605 |
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| Product | methionine synthase |
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| Protein accession | YP_001809521 |
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| Protein GI | 172061869 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.683009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC ACATGATGCG CCTTGCCGGC CTCGAGCCGT TCAACGTCAC GTCCGGGACG
CTCTTCATCA ACGTCGGCGA ACGCACCAAC GTCACCGGCT CGAAGGCGTT CGCGCGGATG
ATCCTGAACG GCCAGTTCGA CGAGGCGCTC GCCGTCGCGC GCCAGCAGGT CGAGAACGGC
GCGCAGGTGA TCGACATCAA CATGGACGAG GCGATGCTCG ATTCGAAGGC GGCGATGGTG
CGCTTCCTGA ACCTGATCGC ATCCGAGCCG GACATCGCGC GCGTGCCGAT CATGATCGAC
TCGTCGAAGT GGGAAGTGAT CGAGGCCGGC CTCAAGTGCG TGCAGGGCAA GGCGATCGTG
AACTCGATCT CGCTGAAGGA AGGCGAGGAA GCGTTCCGCC ATCACGCGAA CCTGATCCGC
CGCTACGGCG CGGCCGCGGT CGTGATGGCG TTCGACGAGA CGGGCCAGGC CGATACCTAC
GCGCGCAAGA CCGAGATCTG CAAGCGCTCG TACGACTTCC TCGTGAACGA AGTCGGCTTC
CCGCCGGAAG ACATCATCTT CGACCCGAAC ATCTTCGCGG TCGCGACCGG CATCGAGGAG
CACAACAACT ACGCGGTCGA CTTCATCGAG GCGACCCGCT GGATCAAGCA GAACCTGCCG
TACGCGAAGG TGAGCGGCGG CGTGTCGAAC GTGTCGTTCT CGTTCCGCGG CAACGACCCG
GTGCGCGAGG CGATTCACAC CGTGTTCCTG TACCACGCGA TCCAGGCGGG GATGGACATG
GGCATCGTGA ACGCGGGCCA GCTCGGCGTG TACGCCGATC TCGACCCGGA GCTGCGCGAG
CGGGTCGAGG ACGTGATCCT GAACCGCCGC GACGATTCCA CCGACCGCCT GCTCGAGATC
GCCGACAAGT TCAAGACCGG CGCCGCGAAG AAGGAAGAGA ATCTCGAGTG GCGCAACCAG
CCGGTCGAGA AGCGCCTCGC GCACGCGCTC GTGCACGGGA TCACGAACTT CATCGTCGAG
GACACCGAGG AGGCGCGCGC GGCCATCGCC GCGGCCGGCG GCCGCCCGAT CAACGTGATC
GAAGGCCCGC TGATGGACGG GATGAACGTC GTCGGCGACC TGTTCGGCCA GGGCAAGATG
TTCCTGCCGC AGGTCGTGAA GTCGGCGCGC GTGATGAAGC AGGCCGTCGC GCACCTGATC
CCGTTCATCG AGGAAGAAAA ACGGCTGCTC GCGGAAGCGG GCGGCGACGT GCGCGCGAAG
GGCAAGATCG TCATCGCGAC CGTGAAGGGC GACGTGCACG ACATCGGCAA GAACATCGTG
TCGGTCGTGC TCCAGTGCAA CAACTTCGAA GTCGTCAACA TGGGCGTGAT GGTCCCGTGC
AACGAGATCC TCGCGAAGGC GAAGGTCGAG GGCGCGGACA TCATCGGGCT GTCGGGCCTC
ATCACGCCGA GCCTCGAGGA AATGGCGTAC GTCGCGTCCG AAATGCAGCG CGACGATTAC
TTCCGCGTGA AGAAGATCCC GCTCCTGATC GGCGGCGCGA CGACCTCGCG CGTGCACACG
GCCGTGAAGA TCGCGCCGCA TTACGAAGGC CCGGTGGTCT ACGTGCCCGA CGCATCGCGC
TCGGTGTCGG TCGCATCGAA CCTGCTGTCG GACGAAGGCG CAACGAAGTA TCTCGACGAA
CTGAAGTCGG ATTACGAACG GATCCGCGAA CAGCACGCGA ACCGCAAGGC CCAGCCGATG
GTCACGCTCG CCGAGGCGCG CGCGAACAAG GCGAAGCTCG ACTGGGCGAG CTACCGGCCC
GTGAAGCCGA AGTTCATCGG CCGCCGCGTG TTCAAGAACT ACGACCTGAA CGAGCTCGCG
AACTACATCG ACTGGGGCCC GTTCTTCCAG ACCTGGGATC TCGCGGGCCC GTACCCGGCG
ATCCTGAACG ACGAGATCGT CGGCGAATCG GCGCGGCGCG TGTTCTCCGA CGCGAAGTCG
ATGCTCGCGC GCCTGATCCA GGGCCGCTGG CTCACCGCGA ACGGCGTGAT CTCGCTGCTG
CCGGCGAATA CGGTCAACGA CGACGACATC GAGATCTACA CCGACGATTC GCGCTCCGAA
GTGCTGCTCA CGTGGCGCAA CCTGCGCCAG CAGAGCGTGC GTCCGGTGGT CGACGGCGTG
ATGCGCCCGA ACCGCTCGCT CGCCGACTTC ATCGCGCCGA AGGAATCGGG CGTCGCCGAC
TACATCGGGA TGTTCGCGGT CACGGCCGGC CTCGGCGTCG ACGTGAAGGA AAAGCAGTTC
GAGGCCGACC ACGACGACTA CAGCGCGATC ATGCTGAAGG CGCTCGCCGA CCGCTTCGCG
GAAGCGTTCG CCGAGGCGAT GCACGCGCGC GTGCGCCGCG AGCTGTGGGG CTATGCGAGC
GGCGAGACGC TCGACAACGA TGCGCTGATC GCCGAGAAGT ACGCGGGCAT CCGCCCGGCG
CCCGGCTACC CGGCGTGCCC CGACCACCTC GTGAAGCGCG ACATGTTCGC CGCGCTGCAT
GCGGAGGAAA TCGGGATGAG CGTGACCGAA TCGCTGGCGA TGCTGCCGGC CGCGAGCGTG
TCGGGCTTCT ATCTCGCACA CCCGGACAGC CGGTACTTCT CGGTCGGCAA AATCGGGCAG
GATCAGCTGG ACGACTATGC GCGACGGATG TCGCTGTCGC TCGCCGACGC GCGGCGCGCG
CTCGCGCCGC AACTCTGA
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| Protein sequence | MTDHMMRLAG LEPFNVTSGT LFINVGERTN VTGSKAFARM ILNGQFDEAL AVARQQVENG
AQVIDINMDE AMLDSKAAMV RFLNLIASEP DIARVPIMID SSKWEVIEAG LKCVQGKAIV
NSISLKEGEE AFRHHANLIR RYGAAAVVMA FDETGQADTY ARKTEICKRS YDFLVNEVGF
PPEDIIFDPN IFAVATGIEE HNNYAVDFIE ATRWIKQNLP YAKVSGGVSN VSFSFRGNDP
VREAIHTVFL YHAIQAGMDM GIVNAGQLGV YADLDPELRE RVEDVILNRR DDSTDRLLEI
ADKFKTGAAK KEENLEWRNQ PVEKRLAHAL VHGITNFIVE DTEEARAAIA AAGGRPINVI
EGPLMDGMNV VGDLFGQGKM FLPQVVKSAR VMKQAVAHLI PFIEEEKRLL AEAGGDVRAK
GKIVIATVKG DVHDIGKNIV SVVLQCNNFE VVNMGVMVPC NEILAKAKVE GADIIGLSGL
ITPSLEEMAY VASEMQRDDY FRVKKIPLLI GGATTSRVHT AVKIAPHYEG PVVYVPDASR
SVSVASNLLS DEGATKYLDE LKSDYERIRE QHANRKAQPM VTLAEARANK AKLDWASYRP
VKPKFIGRRV FKNYDLNELA NYIDWGPFFQ TWDLAGPYPA ILNDEIVGES ARRVFSDAKS
MLARLIQGRW LTANGVISLL PANTVNDDDI EIYTDDSRSE VLLTWRNLRQ QSVRPVVDGV
MRPNRSLADF IAPKESGVAD YIGMFAVTAG LGVDVKEKQF EADHDDYSAI MLKALADRFA
EAFAEAMHAR VRRELWGYAS GETLDNDALI AEKYAGIRPA PGYPACPDHL VKRDMFAALH
AEEIGMSVTE SLAMLPAASV SGFYLAHPDS RYFSVGKIGQ DQLDDYARRM SLSLADARRA
LAPQL
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