Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2757 |
Symbol | |
ID | 6176001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3059992 |
End bp | 3060723 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682534 |
Product | SURF1 family protein |
Protein accession | YP_001809450 |
Protein GI | 172061798 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.65912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGG CGGGCGGCCC GATGAAGATC CGCTGGCTGC CTGCGCTGCT GATTCTCGTC GTCGTCGCGG TCACGATCCG CCTCGGGTTC TGGCAGCGCG AGCGCGCGCA CCAGAAGGAA GCGCTGCAGG CGAGCATCGT GCGCTACGAG CACGCGGCGC CCATCGACGT CGGTGCGCAG CCGATTCCGC TCGCGTCGAT CGAGTTCCAC CGCGTGCGGG CGAGGGGCCG TTTCATGCCG GAGCAGGCGG TGTTCCTCGA CAATCGGCCG TATAACGACC AGCCCGGTTT TTACGTCGTG ATGCCGTTTA AACTCTCGGG CGGCGGCGTC GTGCTGGTGA ACCGCGGCTG GCTGCCGCGC AACATCGCCG ATCGCACGGC GATCGAGCCG TTCGCGACGC CCGACGGCGA CATCGAGATC GAAGGCATCG CGCGCGCCGA CGCGTCGCGT GCGTTCGAAC TCGGCGAAGG CGGCTCGGCC GCGCACCAGA AGATCCGGCA GAACCTGGAC GTCGCCGCGT ATGCGAAGGA AACGGGGCTG CCGCTGCAGC CGTTCGTGAT CCAGCAGACG AGCGACGACG GCGACAAGCT CGTGCGCGAC TGGCCGGCGG CGACGACCGG CGTCGAGCGC AATTACGGTT ACATGTTTCA GTGGTGGGCC ATGGCGGCCG CCGCGCTCGG CTTCGGCCTG TACGCCGCGC GGCGTGCGGC GAAGAAGTCG GCCGGCGCGT GA
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Protein sequence | MRPAGGPMKI RWLPALLILV VVAVTIRLGF WQRERAHQKE ALQASIVRYE HAAPIDVGAQ PIPLASIEFH RVRARGRFMP EQAVFLDNRP YNDQPGFYVV MPFKLSGGGV VLVNRGWLPR NIADRTAIEP FATPDGDIEI EGIARADASR AFELGEGGSA AHQKIRQNLD VAAYAKETGL PLQPFVIQQT SDDGDKLVRD WPAATTGVER NYGYMFQWWA MAAAALGFGL YAARRAAKKS AGA
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