Gene BamMC406_2757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2757 
Symbol 
ID6176001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3059992 
End bp3060723 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID641682534 
ProductSURF1 family protein 
Protein accessionYP_001809450 
Protein GI172061798 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.65912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGG CGGGCGGCCC GATGAAGATC CGCTGGCTGC CTGCGCTGCT GATTCTCGTC 
GTCGTCGCGG TCACGATCCG CCTCGGGTTC TGGCAGCGCG AGCGCGCGCA CCAGAAGGAA
GCGCTGCAGG CGAGCATCGT GCGCTACGAG CACGCGGCGC CCATCGACGT CGGTGCGCAG
CCGATTCCGC TCGCGTCGAT CGAGTTCCAC CGCGTGCGGG CGAGGGGCCG TTTCATGCCG
GAGCAGGCGG TGTTCCTCGA CAATCGGCCG TATAACGACC AGCCCGGTTT TTACGTCGTG
ATGCCGTTTA AACTCTCGGG CGGCGGCGTC GTGCTGGTGA ACCGCGGCTG GCTGCCGCGC
AACATCGCCG ATCGCACGGC GATCGAGCCG TTCGCGACGC CCGACGGCGA CATCGAGATC
GAAGGCATCG CGCGCGCCGA CGCGTCGCGT GCGTTCGAAC TCGGCGAAGG CGGCTCGGCC
GCGCACCAGA AGATCCGGCA GAACCTGGAC GTCGCCGCGT ATGCGAAGGA AACGGGGCTG
CCGCTGCAGC CGTTCGTGAT CCAGCAGACG AGCGACGACG GCGACAAGCT CGTGCGCGAC
TGGCCGGCGG CGACGACCGG CGTCGAGCGC AATTACGGTT ACATGTTTCA GTGGTGGGCC
ATGGCGGCCG CCGCGCTCGG CTTCGGCCTG TACGCCGCGC GGCGTGCGGC GAAGAAGTCG
GCCGGCGCGT GA
 
Protein sequence
MRPAGGPMKI RWLPALLILV VVAVTIRLGF WQRERAHQKE ALQASIVRYE HAAPIDVGAQ 
PIPLASIEFH RVRARGRFMP EQAVFLDNRP YNDQPGFYVV MPFKLSGGGV VLVNRGWLPR
NIADRTAIEP FATPDGDIEI EGIARADASR AFELGEGGSA AHQKIRQNLD VAAYAKETGL
PLQPFVIQQT SDDGDKLVRD WPAATTGVER NYGYMFQWWA MAAAALGFGL YAARRAAKKS
AGA