| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2736 |
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| Symbol | |
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| ID | 6177462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3033921 |
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| End bp | 3035057 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682513 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001809429 |
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| Protein GI | 172061777 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.554056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATG CAACTCTCAA GCTGATCTGG TGGCTGCTCG TCGGCGTGCT GCTGATCGGC
TTCGCCGTCA CCGACGGCTT CGACATGGGC GCGACCGCGC TGCTGCCGTT CCTCGGCAAG
ACCGACGACG AGCGCCGCAT CATCGTCAAC ACGGTCGGCG CGACGTGGGA AGGCAACCAG
GTGTGGCTGA TCACGGCCGG CGGCGCGATG TTCGCCGCGT GGCCGCTCGT CTACGCCGCG
TCGTTCTCCG GCTTCTACTT CGCGATGCTG CTCGTGCTGT TCGCGCTGTT CTTCCGGCCG
GTCGGCTTCG ACTATCGCAG CAAGCGGCCG GACCCGCGCT GGCGTGCAGG CTGGGACTGG
GGCCTGTTCG TCGGCGGCTT CGTGCCGGCG CTGGTGTTCG GCGTCGCGTT CGGCAACCTG
CTGCAGGGCG TGCCGTTCAA GTTCGACAGC GACCTGCGCG TGACCTACTA CGGCGGCTTC
TGGGCGCTGC TGAACCCGTT CGCGCTGCTC TGCGGGCTCG TCAGCCTCAC GATGCTCGTC
GCGCACGGCG CCGCGTTCAT CAAGATGAAG ACCGACGGCG TGATCGCGCG CCGCGCGTCG
ATCGCACTGC GCGTGTCGGC GCTCCTGGCG GTCGTGCTGT TCGTGCTGGC CGGGGTGCTG
GTCGCGTCGA CGATCGGCGG CTTCCACATC ACGCACGCCG CGCCGAACGA CACGGTCGCG
AACCCGCTGC TGAAGGATGT CGCCGCCGGC TCGGGCCTGT GGCTCGCGAA CTACGGCGAG
TATCCGTGGA TGATCGCGGC GCCGCTGGTC GGGATCGCGG GCGGCCTGCT TGCGCTGCTG
CTCGCCGGCT CCAGGCAGGA AAAGACGGCG TTCTTCTGCA CCGGCCTGAT GATCACCGGC
GTGATCCTGA CCGCGGGCTT CTCGATGTTC CCGTTCATCA TGCCGTCGTC GCTCGACCCG
CGCAGCAGCC TGACCGTGTG GGATTCGACG TCGAGCCACA TGACGCTGCA GGTGATGCTG
TTCGCGGTGA TCGTGTTCCT GCCGATCGTC CTGCTCTACA CGAGCTGGGT CTATCGCGTG
ATGCGCGGCA AGGTCACGCG CCAGACGCTC GAAGAGAACG AACACTCGAT GTATTGA
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| Protein sequence | MDYATLKLIW WLLVGVLLIG FAVTDGFDMG ATALLPFLGK TDDERRIIVN TVGATWEGNQ
VWLITAGGAM FAAWPLVYAA SFSGFYFAML LVLFALFFRP VGFDYRSKRP DPRWRAGWDW
GLFVGGFVPA LVFGVAFGNL LQGVPFKFDS DLRVTYYGGF WALLNPFALL CGLVSLTMLV
AHGAAFIKMK TDGVIARRAS IALRVSALLA VVLFVLAGVL VASTIGGFHI THAAPNDTVA
NPLLKDVAAG SGLWLANYGE YPWMIAAPLV GIAGGLLALL LAGSRQEKTA FFCTGLMITG
VILTAGFSMF PFIMPSSLDP RSSLTVWDST SSHMTLQVML FAVIVFLPIV LLYTSWVYRV
MRGKVTRQTL EENEHSMY
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