Gene BamMC406_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2463 
Symbol 
ID6178332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2739683 
End bp2740711 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content74% 
IMG OID641682239 
Producttetraacyldisaccharide 4'-kinase 
Protein accessionYP_001809157 
Protein GI172061505 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1663] Tetraacyldisaccharide-1-P 4'-kinase 
TIGRFAM ID[TIGR00682] tetraacyldisaccharide 4'-kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000327669 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCGC CCGGCGGCCC GCTCGCGCGG CTCGAAGCGC GCGTCACGCG CGAATGGCAG 
CGACGCGGCG CACTCGCTTG GGCGCTCACG CCGTTCGCGT GCGTGTTCGG CCTGTGCGCG
GCGCTGCGCC GTACCGCCTA CGCACAGGGC TGGAAGCAAC CGGTCGACGT CGGCGTGCCC
GTCGTCGTGG TCGGCAACGT GACCGTCGGC GGCACCGGCA AGACGCCGAC CGTGATCGCG
CTCGTCGATG CGCTGCGCGC GGCCGGGTTC ACGCCGGGCG TCGTGTCGCG CGGCTACGGC
GCGAACGTGA AGACACCCAC CGCGGTCACG CCCGCGTCGC GCGCGAGCGC GGCCGGCGAC
GAACCGCTGC TGATCGCGCG CCGCACCGAT GCGCCCGTGT GGGTGTGTCC CGACCGCGTC
GCGGCCGCCC AGGCGCTGCG CGCCGCGCAC CCGGACGTCG ACGTGATCGT CAGCGACGAC
GGCCTGCAGC ACTACCGCCT CGCGCGCACG GTCGAACTCG TCGTGTTCGA CCACCGGCTC
GGCGGCAACG GCTTCCTGCT GCCGGCCGGC CCGCTGCGCG AGCCGCTGTC GCGCCACCGC
GACGCGACGC TCGTCAACGA TCCGTACAGC GGCGCGCTGC CGCCGTGGCC CGACACCTAT
GCGCTCGCGC TGACACCGGG CGCCGCGTGG CACCTCGACC AGCCGGCGCT GCGCCGCCCG
CTGTCGCAGT TCGCGCACGA GCGCGTGCTC GCCGCGGCCG GCATCGGCGC GCCGGAACGC
TTCTTCGCGA CGCTGCGCGC GGCCGGCCTC GCCCCGGCGA CGCGCGCGCT GCCCGACCAT
TACGCGTTCG CCGACAATCC GTTCGTCGAC GACGCAGTCG ACGCCATCCT GATCACCGAG
AAGGATGCAG TAAAATTGGG CGCTTCCTGG CGCGACGCTC GGCTGTGGGT CGTCCCCGTC
GAAGCCGCGC TCGATCCTCG CCTCATTGCC CTCGTTGTGG AGAAACTCCG TGGACGCTCG
CCTGCTTGA
 
Protein sequence
MSAPGGPLAR LEARVTREWQ RRGALAWALT PFACVFGLCA ALRRTAYAQG WKQPVDVGVP 
VVVVGNVTVG GTGKTPTVIA LVDALRAAGF TPGVVSRGYG ANVKTPTAVT PASRASAAGD
EPLLIARRTD APVWVCPDRV AAAQALRAAH PDVDVIVSDD GLQHYRLART VELVVFDHRL
GGNGFLLPAG PLREPLSRHR DATLVNDPYS GALPPWPDTY ALALTPGAAW HLDQPALRRP
LSQFAHERVL AAAGIGAPER FFATLRAAGL APATRALPDH YAFADNPFVD DAVDAILITE
KDAVKLGASW RDARLWVVPV EAALDPRLIA LVVEKLRGRS PA