| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2457 |
|---|
| Symbol | |
|---|
| ID | 6178232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2733234 |
|---|
| End bp | 2734289 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641682233 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_001809151 |
|---|
| Protein GI | 172061499 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000431048 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGACA CGTCGGCCGC GCCCGTCTGT GTGTTCGGCG CGGGTGCGGT CGGCTGCTAT
CTCGGCGGCC GGCTCGCGGC GGCCGGTACG CCGGTGACGC TCGTCGGCCG CGCCCGCATC
GGCGACGCGA TTCGGGCGAA CGAGCTGACC GTGACCGACT CGCGCGGCTA TCGCGCGACG
CTCGAGCCGG CCCAGGTCGC GTTTTCGACC GATCCGGCCG CCGCGGCCAC CGCGCGGCTC
GTGCTCGTCA CGGTGAAGTC GGCCGCGACG CATGACGCCG CGGCGCAGCT CGCCGGCGTG
CTGCGGCCCG GCACGGTCGT CGTCAGTTTC CAGAACGGCC TCTCCAACGC CGACGTGTTG
CGCGAGGCGC TGCCGCAAGC GACCGTGCTG GCCGGCATGG TGCCGTTCAA CGTGATCGAG
CGCGCGCCGG GCGCGTTTCA CCAGGGTTCG ACCGGCGCGC TCGCGGCCGA TGCGTCGCCC
GCGCTGCGGC CGTTCACCGG CGCGTTCGCG CGTGCCGGGC TGCCGCTCGC GCTGCACCGC
GACATGCGCG CCGTGCAATG GGCGAAGCTG CTGCTGAACC TGAACAACGC GGTCAATGCG
CTCGCGAACC TGCCGCTGCG CGACGAACTC TCGCAACGCG CATACCGGCG CTGCGTCGCG
CTGGCGCAGC GCGAAGCGCT TCACGTGTTG GCCCGCGCCG CGATCCGGCC CGCGCGGCTC
ACGCCGTTGC CGGCCGCTTG GATACCCGCG GTGCTGGAGC TCCCCGATCC CGCGTTTCGC
GCGCTGGGCG GCCGGATGCT CGCGATCGAT CCGCTCGCGC GTTCGTCGAT GTCCGACGAT
CTCGCCGCGC GCCGCGCGAC CGAAGTCGAA TGGATCAATG GCGAGATCGT CCGGCTGGCC
GCGCGCTTCG GCGCGCCGGC GCCGGTCAAC GCGCGGCTGT GCGCACTCGT TCACGACGCG
GAAACGGCGG CATCGCGGCC GGCCTGGCGC GGCGACGCGC TGTGGGCAGA ACTGACGGCC
GACGCGACCC GCGCGGGCGG CATGCGAGCG GCGTAG
|
|---|
| Protein sequence | MSDTSAAPVC VFGAGAVGCY LGGRLAAAGT PVTLVGRARI GDAIRANELT VTDSRGYRAT
LEPAQVAFST DPAAAATARL VLVTVKSAAT HDAAAQLAGV LRPGTVVVSF QNGLSNADVL
REALPQATVL AGMVPFNVIE RAPGAFHQGS TGALAADASP ALRPFTGAFA RAGLPLALHR
DMRAVQWAKL LLNLNNAVNA LANLPLRDEL SQRAYRRCVA LAQREALHVL ARAAIRPARL
TPLPAAWIPA VLELPDPAFR ALGGRMLAID PLARSSMSDD LAARRATEVE WINGEIVRLA
ARFGAPAPVN ARLCALVHDA ETAASRPAWR GDALWAELTA DATRAGGMRA A
|
|---|
| |