| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2447 |
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| Symbol | |
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| ID | 6179092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2721973 |
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| End bp | 2722983 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682223 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001809141 |
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| Protein GI | 172061489 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3376] High-affinity nickel permease |
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| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000455077 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCCCA CCCCTGCCCT GCGCCGCCTG CTGACGCTGT ATGCGGGCCT GATCGCCGCC
AACATCGCCG TCTGGCTGTG GGCGCTCGCG GTGCTGCGCG ACCATCCGCT GCTGCTCGGC
ACCGCCGCGA TCGCGTACGG GCTCGGGCTG CGTCATGCGG TCGACGCCGA TCACATCGCC
GCGATCGACG TCGCGACGCG CAAGCTGATG CAGGACGGCC AGCGTCCGGT GACCGTCGGC
CTGTTCTTCT CGCTCGGCCA CTCGACGATC GTGATTGCCG CGACGCTCGG CATCGCGCTG
ACCGCGTTCG CGCTGCGCGA CCGTTTCGAC GCATTCCGCG AGATCGGCGG CACGATCGGC
ACGGCGGTGT CCGCGACGTT CCTGCTCGTG CTCGCATGCA TGAACCTGGT GATTCTGCGC
GGCGTGTGGC GGCGCTACCG CGGCGCGCCG GACCATGCCC ATGCCGGCGC GCACACGCAT
CGGGCGGGCG GGCTCGTGTC GCGGCTGCTG CGCCCGCTGT TCCGGTTCGT GTCGAAAAGC
TGGCACATGT ATCCGGTCGG CGTGCTGTTC GGCCTCGGTT TCGATACTGC AACAGAAATC
GCGCTGCTCG CGATCGCGGC CGCGCAGGCA AGCCACGCGC TGCCGCTCTA CACGGTCATG
CTGTTTCCCG CGCTGTTCGC GGCCGGCATG ACGCTGATCG ACTCGACCGA CAACGTGCTG
ATGATTCATG CGTACGGTTG GGCGATGGAC GACCCGCAGC GCAAGCTGCT CTATAACGCG
AGCATCACGC TGCTGTCGGC GGTCGTCGCG CTGGCCGTCG GCGGGATCGA GGCCGCCGGC
CTGCTCGCCG ACAAGCTGTC GCTGACGGGC CCCGTACGCG ATGCGCTCGA TACGCTCGGC
GAACACTTCG GCGCGATCGG CTATGGCATC GTCGCGCTGT TCCTCGTCGG CTGGATCGCG
TCGATCCTGT GCCATCGCTG GCCGCGCGCT GCCGATCCAA CGGCGCGCTG A
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| Protein sequence | MPPTPALRRL LTLYAGLIAA NIAVWLWALA VLRDHPLLLG TAAIAYGLGL RHAVDADHIA
AIDVATRKLM QDGQRPVTVG LFFSLGHSTI VIAATLGIAL TAFALRDRFD AFREIGGTIG
TAVSATFLLV LACMNLVILR GVWRRYRGAP DHAHAGAHTH RAGGLVSRLL RPLFRFVSKS
WHMYPVGVLF GLGFDTATEI ALLAIAAAQA SHALPLYTVM LFPALFAAGM TLIDSTDNVL
MIHAYGWAMD DPQRKLLYNA SITLLSAVVA LAVGGIEAAG LLADKLSLTG PVRDALDTLG
EHFGAIGYGI VALFLVGWIA SILCHRWPRA ADPTAR
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