| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2314 |
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| Symbol | |
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| ID | 6176684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2575326 |
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| End bp | 2576102 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641682089 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001809009 |
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| Protein GI | 172061357 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.626493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGG CCGCCCTGTG CGCCGCCCTC GCCCTCGTGG CGAGCAGCGC CTTCGCGAAG
GAGTGGAAGA CCGTGCGGAT CGGTGTCGAT GCCAGCTACC CGCCGTTCGA GTCGACCGCG
CCGAGCGGCG AGATCGTCGG TTTCGACGTC GATCTCACCA AGGAAATCTG CAAGCGGATC
AACGTGAAGT GCGTGTGGGT CGCGCAGGAT CTCGACGGGA TCATCCCCGC GCTGAAGGCG
AAGAAGTACG ACGTCATCGT GTCGTCGCTG ACCGTCACGG ACAAGCGCCG CGAGCAGATC
GACTTCTCCG ACAAGGTGTA CGACGCACCG GCACGCATGA TCGCGAAGGC CGGCTCGCCG
CTGCTGCCGA CGGTCGCGTC GCTCAAGGGC AAGCACGTCG GCGTCGAGCA GGGCTCGACG
CAGGAAACCT ACGCGAAGGC GTACTGGGAA CCGCAGGGCG TGACGGTCAT TCCCTACCAG
AACCAGGACC AGGTCTATGC CGATCTCGGC TCGGGCCGCC TCGACGCGAC GCTGCAGGAT
GAACTGCAGG CCGACTACGG CTTCCTGCGC ACGCCGCGCG GCAAGGGCTT CGCGTTCGCC
GGGCCGGAAG TGAAGGATCC GAAGACGATC GGCGACGGCA CCGCGATCGG CCTGCGCAAG
GAAGACACGG ACCTGAAGCT CAGGATCAAC AAGGCGCTGG CCGACATGCA CAAGGACGGC
ACGTACGACC GGTTGTCGCA CAAGTATTTC TCGTTCAGCG TCTACTCGGC TCGCTGA
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| Protein sequence | MKKAALCAAL ALVASSAFAK EWKTVRIGVD ASYPPFESTA PSGEIVGFDV DLTKEICKRI
NVKCVWVAQD LDGIIPALKA KKYDVIVSSL TVTDKRREQI DFSDKVYDAP ARMIAKAGSP
LLPTVASLKG KHVGVEQGST QETYAKAYWE PQGVTVIPYQ NQDQVYADLG SGRLDATLQD
ELQADYGFLR TPRGKGFAFA GPEVKDPKTI GDGTAIGLRK EDTDLKLRIN KALADMHKDG
TYDRLSHKYF SFSVYSAR
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