Gene BamMC406_2311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2311 
Symbol 
ID6176093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2572697 
End bp2573422 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content70% 
IMG OID641682086 
Producttwo component transcriptional regulator 
Protein accessionYP_001809006 
Protein GI172061354 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCC AGATCCTCAT CGTCGACGAC GACCAAGAAC TCCGAGACCT GCTGCGCGAC 
TATCTCGTGC GCCAGGGGAT GGAAGTGTCC GTGCTGCACG ACGCGGCGAC GCTCGAGAAG
CGCCTCGAGC GCGAGCGGCC CGACCTGATC GTGCTGGACC TGATGATGCC GGGCGTGGAC
GGCCTCACCG CGCTGCGCCA GTTGCGTGCG GCCGGCGACG ACATCCCCGT GATCATGCTG
ACCGCGCGCG CGGACGACGT CGACCGCATC GTCGGGCTCG AACTCGGCGC GGACGACTAT
CTCGGCAAGC CATTCAACCC GCGCGAGCTG CTGGCGCGTG TGCAGGCCGT GCTGCGCCGC
CGCCGCGCGA CGCCGTCGGC GGCGGCGCCC GAGCAGCGCG AGCCGTTCGC GTTCGGCCGC
TTCGTGCTCG ACTTCCAGGC GCGCACGCTG TCGGTCGACG GCAAGCCGGC GACGCTGTCG
AGCAGCGAAT TCGCGCTGCT GAAGATCTTC GTGAACCATG CGCTGCGCAC GCTCACGCGC
GAGCGGCTGC TCGAGCTGCT GCACGGGCCC GAGTACGACG GCACCGACCG CGGCATCGAC
GTCCAGGTAT GGCGCCTGCG CCGCATCCTG GAAACGGATC CGTCCGCGCC GCGCTTCATC
CAGACGGTCC GCGGGCGCGG CTACGTGTTC GTGCCCGACG GCGAGGCCCA TGCGCAAGCC
CATTGA
 
Protein sequence
MTTQILIVDD DQELRDLLRD YLVRQGMEVS VLHDAATLEK RLERERPDLI VLDLMMPGVD 
GLTALRQLRA AGDDIPVIML TARADDVDRI VGLELGADDY LGKPFNPREL LARVQAVLRR
RRATPSAAAP EQREPFAFGR FVLDFQARTL SVDGKPATLS SSEFALLKIF VNHALRTLTR
ERLLELLHGP EYDGTDRGID VQVWRLRRIL ETDPSAPRFI QTVRGRGYVF VPDGEAHAQA
H