| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2278 |
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| Symbol | |
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| ID | 6176593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2537876 |
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| End bp | 2539858 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682051 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001808973 |
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| Protein GI | 172061321 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACGA AGAAGCCCAG CGCGGCCTAT AGCGAAGCAT CGATCAAGGT GCTCAAGGGT
CTCGAGCCGG TCAAGCAGCG GCCCGGCATG TACACCCGTA CCGAAAATCC GCTGCACATC
ATTCAGGAAG TCATCGACAA CGCGTCCGAC GAGGCGCTCG GCGGCCACGG CAAGCAGATC
ACGGTCACGC TGCACGCCGA CCAGTCGGTA TCGGTCGAAG ACGACGGCCG CGGCATCCCG
TTCGGCATGC ACCCCGAGGA AGGCGTGCCG GTCGTCGAGA TCGTGTTCAC GCGCCTGCAC
GCGGGCGGCA AGTTCGACAA GGCCGCCGGC GGCGCGTACA CGTTCTCGGG CGGCCTGCAC
GGCGTCGGCG TGTCGGTGAC GAACGCACTG GCGACGCGCC TCGACGTGAC GGTCTGGCGT
GACGGCAAGA TCGCCGAACT CGGCTTCGCC GACGGCGATG TCGTGAAGCC GCTCACGACG
CAAGGCGCGG GGCGCGGCGA GAAGAGGTCC GGCACGCGCG TGCAGGTATG GCCGAATCCG
AAGTACTTCG ATTCGCCGAA CCTGCCGCTC GGCGAGCTGC AGCGCCTGCT GCGCTCGAAG
GCCGTGCTGC TGCCGGGCGT CGAGGTCGTG CTCGTCAACG AGAAGACCGG CGAACGCCAG
ACGTGGAAAT ACGAGGACGG CCTGCGCGGC TACCTGCTCG ACGAGATGAA CGGCAGCGAG
CTGCTGATCC CGCTGTTCGA GGGCGAGCGC TTCGCCGATG CGCGTTCGAC CGACGAAACC
TTCGCCGAAG GCGAGGGCGC GTCGTGGGTC GTCGCATGGA GCGAGGAAGG TTCGCTCGTG
CGCGAGTCGT ACGTGAACCT GATCCCGACG CCGGCCGGCG GCACGCACGA GTCGGGCCTG
CGCGACGGTC TCTACCAGGC GGTGAAAAGC TTCGTCGAAC TGCACAACCT GCAGCCGAAG
GGCGTGAAGC TGCTCGCGGA AGACGTGTTC GCGCGCGTGT CGTTCGTGCT GTCCGCGAAG
GTGCTCGACC CGCAGTTCCA GGGGCAGATC AAGGAACGCC TGAACAGCCG CGACGCGGTG
AAGCTCGTGT CGTCGTTCTC GCGGCCGGCG CTCGAGCTGT GGCTGAACCA GCACGTCGAG
CACGGCAAGA AGCTCGCCGA ACTCGTGATC AAGCAGGCGC AGGCGCGCAC GCGCGCGGGC
CAGAAGGTCG AGAAGCGCAA GAGCTCGGGC GTCGCGGTGC TGCCCGGCAA GCTGACCGAT
TGCGAGACGG AAGATATCGC GCGCAACGAG CTGTTCCTCG TCGAGGGCGA CTCCGCGGGC
GGTTCCGCGA AGATGGGCCG CGACAAGGAA TACCAGGCGA TCCTGCCGCT GCGCGGCAAG
GTGCTGAACA CCTGGGAAAC CGAGCGCGAC CGCCTGTTCG CGAACAACGA GGTGCACGAC
ATCTCGGTGG CGATCGGCGT CGATCCGCAC AGCCCGGACG AAACCGTCGA CCTGTCGAAC
CTGCGCTACG GCAAGATCTG CATCCTGTCG GACGCGGACG TCGACGGCTC GCACATCCAG
GTGCTGCTGC TCACGCTGTT CTTCAAGCAC TTCCCGCAGC TGATCGAACG CGGCCACGTG
CATGTCGCGC GGCCGCCGCT GTTCCGCGTC GATGCACCCG CGCGCGGCAA GAAGCCCGCG
CAGAAGCTCT ACGCGCTCGA CGAAGGCGAA CTCGAGGCGA CGCTCGACAA GCTGCGCAAG
GACGGCGTGC GTGAAACGCA ATGGAGCATC AGCCGCTTCA AGGGGCTCGG CGAAATGAGC
GCGGAGCAGC TGTGGGACAC GACGATGAAC CCCGACACGC GCCGCCTGAT GCCGGTGAAG
CTCGGCGAGC TCGACTACGA GTCGACCGTC GCGCGGATGA CGATGCTGAT GGGCAAGGGC
GAGGCAGCCG CGCGGCGCGG CTGGCTCGAG GAAAAGGGCA ACGACGTCGA AGCGGACATC
TAA
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| Protein sequence | MSTKKPSAAY SEASIKVLKG LEPVKQRPGM YTRTENPLHI IQEVIDNASD EALGGHGKQI
TVTLHADQSV SVEDDGRGIP FGMHPEEGVP VVEIVFTRLH AGGKFDKAAG GAYTFSGGLH
GVGVSVTNAL ATRLDVTVWR DGKIAELGFA DGDVVKPLTT QGAGRGEKRS GTRVQVWPNP
KYFDSPNLPL GELQRLLRSK AVLLPGVEVV LVNEKTGERQ TWKYEDGLRG YLLDEMNGSE
LLIPLFEGER FADARSTDET FAEGEGASWV VAWSEEGSLV RESYVNLIPT PAGGTHESGL
RDGLYQAVKS FVELHNLQPK GVKLLAEDVF ARVSFVLSAK VLDPQFQGQI KERLNSRDAV
KLVSSFSRPA LELWLNQHVE HGKKLAELVI KQAQARTRAG QKVEKRKSSG VAVLPGKLTD
CETEDIARNE LFLVEGDSAG GSAKMGRDKE YQAILPLRGK VLNTWETERD RLFANNEVHD
ISVAIGVDPH SPDETVDLSN LRYGKICILS DADVDGSHIQ VLLLTLFFKH FPQLIERGHV
HVARPPLFRV DAPARGKKPA QKLYALDEGE LEATLDKLRK DGVRETQWSI SRFKGLGEMS
AEQLWDTTMN PDTRRLMPVK LGELDYESTV ARMTMLMGKG EAAARRGWLE EKGNDVEADI
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