Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2241 |
Symbol | |
ID | 6177884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2499990 |
End bp | 2501237 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641682014 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_001808936 |
Protein GI | 172061284 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.695665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACC GTTTACGCGA GCATGACGCA CGCGCTTCGA CACGAGGGTT CCCGCTTAGG CTCGCTCACT GGATGAAAGG TTTCGCGCTC GTGCTTTCCT TGTCCGCGAC CTCCAGCTTT GCACAACAAT CGCCGGCACC GGCCGACGGC GCCTTCCACC TGCTCGTCGG CACCTATACG GGGCACGGCA GCGACGGCAT CTATGTGTAC CGCTTCGATA CGAAAACGGG CAGCGTCGCG CCCGTGTCGT CGGCGAAGAC GGTAAATCCG TCCTATCTGT TGCCAAGCCG CGACGGTCGC ACCGTCTACG CGGTCAACGA ACTGCCCGGC GACAACGGAC CGGCCACGCA GCGCGGCGGC ATCAGCGCAT TCGGCTTCGA TCCGAAAACG GGTGCACTCA CATTCATCGA CCGCGTGTCG TCGGAAGGGA ACGACCCGTG CTATCTCGCG CTGTCGCCGG ACGGCAAGTA CCTCGTCACG GCCAACTACT CTGTCGCGGC CGATCCCGGC GGCAGCTTCG CGGTGTTCCC GACCCGCGAC GGCGGCTCGG TCGGCTCGGC CGTGCTGACG GTGCACCACG AAGGCACGGG GCCCGTGAAG GGCCGCCAGG ACGGCGCGCA CGTGCACTCG ACGGTGTTCT CGCCCGATGG TCGCTACCTG TTCGTGCAGG ATCTCGGCGC GGACAAGCTG TATGGCTACC GCTACACGGT GGACGGCAGC CGCGGGCTGA TCAGCCCGAC CGACACGCGC TACACGCCCG TGAAGGCCGG CTCCGGCCCA CGTCACATGG TGTTCGGCGC CGACGGGCGG TTCGCGTACG TGACGAGCGA ACTCAATGCC TCGGTCGAGG TGTTCGGTTA CCACGACGGC AAGCTGACGC CGGTCCAGAC GCTGCCGATG ACGGTGCCGG GTTTCAAGGG CAAGGTCGGT GGCGGCGCGA TCCATCTGTC TCCGGACGGC CGCTTCCTGT ACGTGACCAA CCGCGGCGAC GTGAACGAGA TCGTGATCTA CGCGGTGAAC CGGACGGATG GACGACTGAA GACCGTCGGC CGTCAGTCGA GCCTCGGCAA GACGCCGCGT GAATTCCTGA TCGATCCGAC CGGCAAGTGG CTGATCGTCG GCAACCAGGA CAGCGACACG TTCTACGTGT TCAGCCGCGA TGTCGAAACG GGGCAGCTCG GCGCGAATCC GCAGAAGGTG GCGCTCGGCA GCCCGGTCGA CTTCAAGCTG GTGCCGGTGG CGCAGTAA
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Protein sequence | MPNRLREHDA RASTRGFPLR LAHWMKGFAL VLSLSATSSF AQQSPAPADG AFHLLVGTYT GHGSDGIYVY RFDTKTGSVA PVSSAKTVNP SYLLPSRDGR TVYAVNELPG DNGPATQRGG ISAFGFDPKT GALTFIDRVS SEGNDPCYLA LSPDGKYLVT ANYSVAADPG GSFAVFPTRD GGSVGSAVLT VHHEGTGPVK GRQDGAHVHS TVFSPDGRYL FVQDLGADKL YGYRYTVDGS RGLISPTDTR YTPVKAGSGP RHMVFGADGR FAYVTSELNA SVEVFGYHDG KLTPVQTLPM TVPGFKGKVG GGAIHLSPDG RFLYVTNRGD VNEIVIYAVN RTDGRLKTVG RQSSLGKTPR EFLIDPTGKW LIVGNQDSDT FYVFSRDVET GQLGANPQKV ALGSPVDFKL VPVAQ
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