Gene BamMC406_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2241 
Symbol 
ID6177884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2499990 
End bp2501237 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content66% 
IMG OID641682014 
Product6-phosphogluconolactonase 
Protein accessionYP_001808936 
Protein GI172061284 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.695665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACC GTTTACGCGA GCATGACGCA CGCGCTTCGA CACGAGGGTT CCCGCTTAGG 
CTCGCTCACT GGATGAAAGG TTTCGCGCTC GTGCTTTCCT TGTCCGCGAC CTCCAGCTTT
GCACAACAAT CGCCGGCACC GGCCGACGGC GCCTTCCACC TGCTCGTCGG CACCTATACG
GGGCACGGCA GCGACGGCAT CTATGTGTAC CGCTTCGATA CGAAAACGGG CAGCGTCGCG
CCCGTGTCGT CGGCGAAGAC GGTAAATCCG TCCTATCTGT TGCCAAGCCG CGACGGTCGC
ACCGTCTACG CGGTCAACGA ACTGCCCGGC GACAACGGAC CGGCCACGCA GCGCGGCGGC
ATCAGCGCAT TCGGCTTCGA TCCGAAAACG GGTGCACTCA CATTCATCGA CCGCGTGTCG
TCGGAAGGGA ACGACCCGTG CTATCTCGCG CTGTCGCCGG ACGGCAAGTA CCTCGTCACG
GCCAACTACT CTGTCGCGGC CGATCCCGGC GGCAGCTTCG CGGTGTTCCC GACCCGCGAC
GGCGGCTCGG TCGGCTCGGC CGTGCTGACG GTGCACCACG AAGGCACGGG GCCCGTGAAG
GGCCGCCAGG ACGGCGCGCA CGTGCACTCG ACGGTGTTCT CGCCCGATGG TCGCTACCTG
TTCGTGCAGG ATCTCGGCGC GGACAAGCTG TATGGCTACC GCTACACGGT GGACGGCAGC
CGCGGGCTGA TCAGCCCGAC CGACACGCGC TACACGCCCG TGAAGGCCGG CTCCGGCCCA
CGTCACATGG TGTTCGGCGC CGACGGGCGG TTCGCGTACG TGACGAGCGA ACTCAATGCC
TCGGTCGAGG TGTTCGGTTA CCACGACGGC AAGCTGACGC CGGTCCAGAC GCTGCCGATG
ACGGTGCCGG GTTTCAAGGG CAAGGTCGGT GGCGGCGCGA TCCATCTGTC TCCGGACGGC
CGCTTCCTGT ACGTGACCAA CCGCGGCGAC GTGAACGAGA TCGTGATCTA CGCGGTGAAC
CGGACGGATG GACGACTGAA GACCGTCGGC CGTCAGTCGA GCCTCGGCAA GACGCCGCGT
GAATTCCTGA TCGATCCGAC CGGCAAGTGG CTGATCGTCG GCAACCAGGA CAGCGACACG
TTCTACGTGT TCAGCCGCGA TGTCGAAACG GGGCAGCTCG GCGCGAATCC GCAGAAGGTG
GCGCTCGGCA GCCCGGTCGA CTTCAAGCTG GTGCCGGTGG CGCAGTAA
 
Protein sequence
MPNRLREHDA RASTRGFPLR LAHWMKGFAL VLSLSATSSF AQQSPAPADG AFHLLVGTYT 
GHGSDGIYVY RFDTKTGSVA PVSSAKTVNP SYLLPSRDGR TVYAVNELPG DNGPATQRGG
ISAFGFDPKT GALTFIDRVS SEGNDPCYLA LSPDGKYLVT ANYSVAADPG GSFAVFPTRD
GGSVGSAVLT VHHEGTGPVK GRQDGAHVHS TVFSPDGRYL FVQDLGADKL YGYRYTVDGS
RGLISPTDTR YTPVKAGSGP RHMVFGADGR FAYVTSELNA SVEVFGYHDG KLTPVQTLPM
TVPGFKGKVG GGAIHLSPDG RFLYVTNRGD VNEIVIYAVN RTDGRLKTVG RQSSLGKTPR
EFLIDPTGKW LIVGNQDSDT FYVFSRDVET GQLGANPQKV ALGSPVDFKL VPVAQ