Gene BamMC406_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2236 
Symbol 
ID6177824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2492206 
End bp2492589 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content66% 
IMG OID641682009 
Productperiplasmic protein 
Protein accessionYP_001808931 
Protein GI172061279 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.31856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCC AAACCTTCGC CGCGCTCGCG CTGGCCGGCT CCGCCGTTTC CGTCGCGCAT 
GCCGCGCAAC TGACCGTCGA GGAAATCGAC GCCGATGCGC GCGAGCAGAC CATCTATCAG
TGCGCGAACC TGAAGCGGCC GGTACGCGTG TCGTACTGGC GCGCGGCCAA CGGCCAGAGC
TTCGCGCTGG TGCCGGTCAA CGGGCAGCAG TTGCTGTTCG TCGATACCGT ATCGGCGTCG
GGCGCGCGCT ACCAGGCCGG ACGCTATACG TGGTGGACGA AGGGCAGGGA AGGGACGCTG
CGCGACGAGA TCGCCGACCA GAATGCGGCA CCGCTGCTGG GCGACTGCAT GCAGGTCGAG
AAGAAGAAAA AGAAGAAGGG CTGA
 
Protein sequence
MIRQTFAALA LAGSAVSVAH AAQLTVEEID ADAREQTIYQ CANLKRPVRV SYWRAANGQS 
FALVPVNGQQ LLFVDTVSAS GARYQAGRYT WWTKGREGTL RDEIADQNAA PLLGDCMQVE
KKKKKKG