Gene BamMC406_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2228 
Symbol 
ID6178177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2479264 
End bp2480106 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID641682001 
Productglycosyl transferase family protein 
Protein accessionYP_001808923 
Protein GI172061271 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCA TCATCATCCC GACCTGGAAC AACCTGCCGT ACCTCAAGCT CGTCGTCGAC 
AGCCTGCGCC GTCATTCGGC GTACGACCAC CAGATCATCG TGCACGTGAA CGACGGCTCG
GACGGCACGC TCGACTGGGT GCGCGACGAA GGCATCGAGC ACACCGCGTC GCCGACCAAC
ATCGGCATCT GCCACGCGGT GAACCTGGCT GCCGCGCGCG CGACGCGCGA CTACGTCGTC
TACATGAACG ACGACATGTA CTGCTGCCCC GGCTGGGATG CGGCGCTCGT GCGGCGCATC
GAGCAGATGC CGACCGACCT GTTCATGCTG TCCGGCACGA TGGTCGAGCC GGTCGACACG
CGCAACCCGT GCGTCGTGGT CAGCAATTTC GGCCGCGACG CCGAGCAGTT CGACGCGGCC
GGCCTCGTCG CGGCCACGCC GCGGCTCGCG CGCGCGGACT GGCTCGGCTC GACCTGGCCG
CCGACGCTCG TGCACCGCGA CTGGTGGAAC CGCATCGGCG GCTACAGCAG CGAGCTGTCG
CCGGGGATGA GCAGCGACAA CGACTTCTCG ATGAAATTCT GGGACGCCGG CTGCCGGATC
TTCCTCGGCG TCGGCGACAG CCTCGTCTAT CACTTTCAGC AGAAGAGCAC CGGCAAGATC
GTCAAGAACG ACGGCCGCCG CCAGTTCCTC AACAAATGGG GCATGACGCA GGCCACGTTC
GACCGCTATT ACCTGCATCG CGGCGAGCCG GCCGGCTCGC GGATCGCGCT CGACACGCCG
ACTGTCGACG GGCGCCTCAA GCGCGCGCTG CTGCGCTCGC GGATCAAGCG CGCATTCAGC
TGA
 
Protein sequence
MFSIIIPTWN NLPYLKLVVD SLRRHSAYDH QIIVHVNDGS DGTLDWVRDE GIEHTASPTN 
IGICHAVNLA AARATRDYVV YMNDDMYCCP GWDAALVRRI EQMPTDLFML SGTMVEPVDT
RNPCVVVSNF GRDAEQFDAA GLVAATPRLA RADWLGSTWP PTLVHRDWWN RIGGYSSELS
PGMSSDNDFS MKFWDAGCRI FLGVGDSLVY HFQQKSTGKI VKNDGRRQFL NKWGMTQATF
DRYYLHRGEP AGSRIALDTP TVDGRLKRAL LRSRIKRAFS