Gene BamMC406_2191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2191 
Symbol 
ID6177645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2441309 
End bp2442070 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content73% 
IMG OID641681964 
Productglucose-1-dehydrogenase 
Protein accessionYP_001808886 
Protein GI172061234 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAC TGTCCGATCG CAAGGCCGTC CTGATCACCG GCGCGAGCCG CGGCATCGGC 
CGCGCGACCG CCGTGCTCGC GGCCAAGCGC GGCTGGGACG TCGGCATCAA CTATGCGCGC
GACGCGGCGG CCGCCGAACT CACCGCGCAA GCCGTTCGCG ACGCCGGCGC ACGCGCGTGC
GTCGTCGCCG GCGACGTCGC GAACGAAGCG GACGTCATCG CGATGTTCGA CGCCGTCACG
GCGGCGTTCG GCCGCCTCGA CGCGCTCGTC AACAATGCGG GGATCGTCGC GCCGTCGATG
CCGCTCGCCG ACATGCCGGC CGACCGGCTG CGGCGGATGT TCGACACCAA CGTGCTCGGC
GCTTATCTGT GCGCGCGCGA AGCCGCGCGC CGGCTGTCCA CCGACCGCGG CGGACGCGGC
GGCGCGATCG TCAACGTGTC GTCGATCGCG TCCCGGCTCG GTTCACCGAA CGAATACGTC
GACTACGCGG GCTCGAAAGG CGCGGTCGAT TCGCTGACGA TCGGCCTGGC GAAGGAGCTC
GGCCCGCACG GCGTGCGCGT CAACGCGGTG CGCCCGGGGC TGATCGAGAC CGAAATCCAT
GCCAGCGGCG GCCAGCCGGG CCGCGCCGCG CGCCTCGGCG CGCAGACACC GCTCGGCCGT
GCGGGCGAAG CGCAGGAGAT CGCCGAGGCG ATCGTCTGGC TGCTCGGCGA CGCGGCGTCA
TACACGACAG GCGCCCTGCT CGACGTCGGC GGCGGACGAT AA
 
Protein sequence
MPTLSDRKAV LITGASRGIG RATAVLAAKR GWDVGINYAR DAAAAELTAQ AVRDAGARAC 
VVAGDVANEA DVIAMFDAVT AAFGRLDALV NNAGIVAPSM PLADMPADRL RRMFDTNVLG
AYLCAREAAR RLSTDRGGRG GAIVNVSSIA SRLGSPNEYV DYAGSKGAVD SLTIGLAKEL
GPHGVRVNAV RPGLIETEIH ASGGQPGRAA RLGAQTPLGR AGEAQEIAEA IVWLLGDAAS
YTTGALLDVG GGR