Gene BamMC406_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2140 
Symbol 
ID6176009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2391975 
End bp2392757 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID641681912 
Producthypothetical protein 
Protein accessionYP_001808835 
Protein GI172061183 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.540337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.546865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATCG TTCTCTCTCC CGCCAAATCC CTCGACTACG ATACGCCCGC CCATGTCCCG 
TCTTACACGA AGCCTGCATT CGTCGACGAT GCGTCGGAAC TGATCGACGG CCTGCGCAAG
CTGTCGCCGC AGGACATCGC GACGCTGATG GACATCTCCG ACCCGCTCGC GCGCCTGAAC
TTCCAGCGCT ACGCGGACTG GTCGCCGACC TTCTCGCCGG CCAATGCGAA GCAGGCGGTG
CTCGCGTTCA ACGGTGACGT GTACGAAGGG TTCGATGCCA AATCGCTGTC GGCCGCCGAT
CTCGACTACG CGCAGCAGCA CGTGCGCGTG CTGTCGGGCC TGTACGGGCT GCTGCGCCCG
CTCGACCTGC TGCAGCCTTA CCGGCTCGAG ATGGGCACTC GTTTCGCGAA CGCGCGCGGC
AAGGATCTGT ACGCGTTCTG GGGCGACCGG ATCACGCGTG CGCTGAACGA GCAGCTCGAG
ACGCGCAGCG GTGCGGCGCG CGTGCTGGTC AACTGCGCGT CGACCGAGTA TTTCAAGTCG
GTCAAGCCGA AACTGCTGGC CGCACCGGTC GTCACGCCGG TGTTCGAGGA CTGGAAGGGC
GGCCGCTACA AGATCATCAG CTTCCACGCG AAGCGCGCCC GTGGCCTGAT GGCGCGCTAT
ATCGTCGAGA ACCGCATCGC CGAACCGGCG GCGCTGAAGG ATTTCGCGAT GGAAGACTAC
GTGTTCGACG CCGCTGCATC GAACGATTCG ACTTACGTAT ATCGCCGGCG AATCGGCGAG
TGA
 
Protein sequence
MIIVLSPAKS LDYDTPAHVP SYTKPAFVDD ASELIDGLRK LSPQDIATLM DISDPLARLN 
FQRYADWSPT FSPANAKQAV LAFNGDVYEG FDAKSLSAAD LDYAQQHVRV LSGLYGLLRP
LDLLQPYRLE MGTRFANARG KDLYAFWGDR ITRALNEQLE TRSGAARVLV NCASTEYFKS
VKPKLLAAPV VTPVFEDWKG GRYKIISFHA KRARGLMARY IVENRIAEPA ALKDFAMEDY
VFDAAASNDS TYVYRRRIGE