Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2139 |
Symbol | |
ID | 6176006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2390634 |
End bp | 2391788 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681911 |
Product | peptidase M14 carboxypeptidase A |
Protein accession | YP_001808834 |
Protein GI | 172061182 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.187915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.791166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTTT CGATCACCAG CAATTTCGAC GCGGGCGCCA TCGACGTCGT GTCGTGCGAC AGCCCGGACG CGATCCGGCT GCGCGTGCGC GGCGACAACC GCTCGGAATT CGCCCAATGG TTCTACTACC GTCTCACGGG CGCACGCGGC GAGCGTTGCG TGATGTCGTT CGAGAATGCG GCCGAATGCG CGTATCCGTC GGGATGGCGC AACTACAGCG CGGTCGCGAG CTACGACCGC GTCGACTGGT TCCGCGTGCC GACGACCTTC GACGGCAAGA CGATGACCAT CGACCATACG CCCGAGTTCG ACAGCATCTA CTACGCGTAT TTCGAGCCGT ATTCGGAAGA GCGCCACGCG GCGTTTCTCG GCGCGGTCCA GCAGTTGCCG CAGGCGCGCG TCGTCGAGCT TGGCCGCACG GTCGAAGGCC GTCCGATGTC GTTGCTGACG CTCGGTACGC CGGAAGTCGA CGGCGCACCG AAGAAGAAGG TGTGGGTCAT CGCGCGTCAG CACCCCGGCG AGACGATGGC CGAATGGTTC ATCGAAGGGC TCGTCAAGCG GCTGGCCGGC TGGGGCGATT GGGCGGGCGA TCCGGTGGCG CGCAAGCTCT ACGACCGCGC GACTTTCTAC ATCGTCCCGA ACATGAACCC GGACGGCAGC GTGCACGGCA ACCTGCGCAC CAACGCGGCG GGCGCGAACC TGAACCGCGA GTGGATGGAG CCCGATGCCG AGCGCAGCCC CGAGGTGCTG GCCGTGCGCG ATGCGATCCA TGCGATCGGC TGCGACATGT TCTTCGACAT TCACGGCGAC GAGGATCTGC CTTACGTGTT CGTCGCGGGT TCGGAGATGC TGCCGAGCTT CACCGAGCAG CAGCGCAAGG AGCAGACCGC GTTCATCGAT GCGTTCAAGG TCGCGAGCCC GGATTTCCAG ACCGAGCACG GCTACGCGGC GAGCAAGTAC AAGGAAGACG CGCTCAAGCT CGCATCGAAG TATATCGGCC ACCAGTTCGG GTGCCTGTCG CTGACGCTCG AGATGCCGTT CAAGGACAAC GCGAACCTGC CCGACGAGCG GGTCGGCTGG AACGGTGAAC GCAGTGCGGC ACTGGGTGCA GCGATGCTGG CGGCAATCCT GGTGCACGTC GAGACGTTCG CGTAA
|
Protein sequence | MTLSITSNFD AGAIDVVSCD SPDAIRLRVR GDNRSEFAQW FYYRLTGARG ERCVMSFENA AECAYPSGWR NYSAVASYDR VDWFRVPTTF DGKTMTIDHT PEFDSIYYAY FEPYSEERHA AFLGAVQQLP QARVVELGRT VEGRPMSLLT LGTPEVDGAP KKKVWVIARQ HPGETMAEWF IEGLVKRLAG WGDWAGDPVA RKLYDRATFY IVPNMNPDGS VHGNLRTNAA GANLNREWME PDAERSPEVL AVRDAIHAIG CDMFFDIHGD EDLPYVFVAG SEMLPSFTEQ QRKEQTAFID AFKVASPDFQ TEHGYAASKY KEDALKLASK YIGHQFGCLS LTLEMPFKDN ANLPDERVGW NGERSAALGA AMLAAILVHV ETFA
|
| |