| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2072 |
|---|
| Symbol | |
|---|
| ID | 6176902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2316169 |
|---|
| End bp | 2317071 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641681839 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001808769 |
|---|
| Protein GI | 172061117 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGC GGCAGTTGCG CTACTTCGTG GCGGTCGCCG AGGAACTGCA TTTCGGGCGC
GCGGCGAAGC GCCTGTTCAT CTCGCAGCCG GCGCTGAGCT TCGACATCCG CAAGTTCGAG
GAAGCGCTCG GCGTGCAGCT CTTTTCACGC ACCAACAAGA CGGTCGCGCT GACCAACGCG
GGCGCGGTGC TGCTCGGCGA AGCGCGCCGG CTGCTGCTGC AGGCGAGCGA GGCCGAGCGT
CTCACGGTGC GCTCGGCGTC CGGCCTCGCG GGTCGGCTGA GGATCGGCTT CGTCCATTCG
ATGCTGTATC GCGGGCTGCC CGATGCGGTG CAGCGCTTCG AGGCCGACTA TCCGGGCGTG
GAGATCGTGC TGAGCGAGAT GAACACGCAC GCGCAGGTGC AGGCGATCCA GCGCGGCCAG
ATCGATCTCG GTTACGCGCA CTGGGGCCAC TGCCCGCCCG AGGTCGAATC GACGCCCGTC
TACGCGGAAC CGTTCGTGTG CTGCCTGCCG GCCGCGCATC CGCTCGCGGG GCGCCGGCAG
GTCGCGCTCG CCGCGCTGGC CGCGGAACCG TTCATCCTGT TTCCGCGCGA CGCGGCGCCG
CACTATCACG ACCTGATCAT CGCGCAATGC GTGAACGCGG GATTCAGCCC GCTGATCCGT
CACGAGGCGC GGCTGTGGCA GACGATCCTG TCGATGATCG AGTTCGGGAT GGGCATCGCG
CTGGTGCCGC GCGTGCTGCA GCAGGTGAAG AGCGACCGGC TCGCGTTCCG GCCGCTGAAG
GATGCGTCGC TCGAATCGCG CACGCTGGAA CTGAAGCGCA GCGGCACCGC CGAACCGGTC
GCGCTGCGCT TCGCCGACTA CGTGCGCGCG TCGATCGACG CGCTGCCCGC GCTGGCGGGC
TGA
|
|---|
| Protein sequence | MELRQLRYFV AVAEELHFGR AAKRLFISQP ALSFDIRKFE EALGVQLFSR TNKTVALTNA
GAVLLGEARR LLLQASEAER LTVRSASGLA GRLRIGFVHS MLYRGLPDAV QRFEADYPGV
EIVLSEMNTH AQVQAIQRGQ IDLGYAHWGH CPPEVESTPV YAEPFVCCLP AAHPLAGRRQ
VALAALAAEP FILFPRDAAP HYHDLIIAQC VNAGFSPLIR HEARLWQTIL SMIEFGMGIA
LVPRVLQQVK SDRLAFRPLK DASLESRTLE LKRSGTAEPV ALRFADYVRA SIDALPALAG
|
|---|
| |