Gene BamMC406_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2063 
Symbol 
ID6176155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2303187 
End bp2304161 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content65% 
IMG OID641681830 
Productfatty acid hydroxylase 
Protein accessionYP_001808760 
Protein GI172061108 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.589022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCACC TGATCGATGC GTTCGTGTCG GACATCCAGA CCTGGCTGTA CGTCGACGTC 
GTGCAGCCGC TCCTCTTCAA GTTCAACCTG ATGGACTATG ACGAGGACAC CTACGACGCA
CTGTACTGGG TGATCATCGG CGCGCTGCAG ATGGTGCTGA TGTTCGCGCT GCTGCGCCCG
CTCGAGGCGC TCGCGCCCGT CGAGCGCTGG AAGAACCGAC GCGCGGTGCG GGTCGACGTG
ATCTACACGG CGATCTCGAA GCTCGGCATC TATGCGCTGT TCTTCTTCTT CGCGCTGCAG
CCGGTGTTCG ACAAGTTCCA GTCGTGGCTG CGCCTGCACG GCGTCGCGAA CTTCAACCTC
GACTATCTGT GGCCCGGCGT GACCTCGCAG CCGATCGTCG CGTTCGCGAT CTACCTCGTC
GTGCTCGACT TCGCCGGCTA CTGGTATCAC CGCTGGCAGC ACAAGTTCGG CATCTGGTGG
GAGCTGCACG CGGTCCATCA CAGCCAGCGG CAGATGTCGC TGTGGTGCGA CGACCGCAAC
CACCTGCTCG ACGACGTGCT CCAGTCGTGC TTCTTCGCTG CGATCGCGCT CGTGATCGGC
GTGACGCCGT CGCAGTTCGT CGTGCTGACC GCGGTCACCA ACTTCCTGCA GAGCATCCAG
CATACGAATG CGCGGCTGTC GTTCGGCCGG CTCGGCGAGC GCCTGCTCGT GAGCCCGACC
TTCCACCGGC GCCACCACGC GGTCGGCTAC GGTCACGAAG GCACCAAGTA CGGCTGCAAT
TTCGGCGTGC TGTTCCCGTG GTGGGACGTC ATGTTCGGCA CCGCGTCGTG GAACCGCACG
GTCGAGCCGA CCGGTATCCG CGAGCAGATC GACGGCGTGT CCTACGGCGA TGGCTTCTGG
GCGCAGCACG GCCTCGCGTT CGTGCGGATC TTCCGGCGCC TCGTTCCCGC GAAGCGCGGC
GCGGCGTCGG CCTGA
 
Protein sequence
MLHLIDAFVS DIQTWLYVDV VQPLLFKFNL MDYDEDTYDA LYWVIIGALQ MVLMFALLRP 
LEALAPVERW KNRRAVRVDV IYTAISKLGI YALFFFFALQ PVFDKFQSWL RLHGVANFNL
DYLWPGVTSQ PIVAFAIYLV VLDFAGYWYH RWQHKFGIWW ELHAVHHSQR QMSLWCDDRN
HLLDDVLQSC FFAAIALVIG VTPSQFVVLT AVTNFLQSIQ HTNARLSFGR LGERLLVSPT
FHRRHHAVGY GHEGTKYGCN FGVLFPWWDV MFGTASWNRT VEPTGIREQI DGVSYGDGFW
AQHGLAFVRI FRRLVPAKRG AASA