Gene BamMC406_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2035 
Symbol 
ID6175941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2267009 
End bp2267416 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content62% 
IMG OID641681801 
Productscaffold protein 
Protein accessionYP_001808732 
Protein GI172061080 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.710086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATACA GCAACAAGGT TCTGGATCAC TACGAAAACC CGCGTAACGT CGGTTCGTTC 
GCGAAGGACG ACGACGCGGT CGGTACGGGC ATGGTCGGCG CGCCGGCCTG CGGCGACGTG
ATGAAGCTGC AGATCCGCGT CAGCGCGGAC GGCGTGATCG AAGACGCGAA GTTCAAGACG
TACGGCTGCG GTTCGGCCAT CGCGTCGAGC TCGCTCGTGA CCGAATGGGT GAAGGGCAAG
ACGCTCGACG AGGCGCTGTC GATCAAGAAC ACGCAGATCG CCGAAGAACT TGCGCTGCCC
CCGGTGAAGA TTCACTGCTC GATTCTCGCG GAAGACGCGA TCAAGGCAGC CGTGGCCGAC
TACAAGAAGC GCCACGACAC CACGGAAGGC GATCAGGCTG CGGCCTGA
 
Protein sequence
MSYSNKVLDH YENPRNVGSF AKDDDAVGTG MVGAPACGDV MKLQIRVSAD GVIEDAKFKT 
YGCGSAIASS SLVTEWVKGK TLDEALSIKN TQIAEELALP PVKIHCSILA EDAIKAAVAD
YKKRHDTTEG DQAAA