Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2018 |
Symbol | |
ID | 6178907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2247323 |
End bp | 2248177 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681784 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_001808715 |
Protein GI | 172061063 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0111887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGT ACGATTTCGA GGTCGGTCTC GACCAGCCTT TCTTCCTGAT CGCGGGTACC TGCGTCGTCG AATCGGAGCA AATGACGATC GACACGGCGG GCCGCCTGAA GGAAATCTGC GCGAAGCTGA ACGTGCCGTT CATCTACAAG TCGTCCTATG ACAAGGCGAA CCGCAGCTCG GGCAAGTCGT TTCGCGGCCT CGGAATGGAC GAGGGCCTGC GGATCCTCGG CGAGGTGAAG CGCCAGCTCG GCCTGCCGGT GCTGACCGAC GTGCATTCGA TCGACGAGAT CGAGCAGGTC GCGTCGGTCG TCGACGTGCT GCAGACGCCC GCGTTCCTGT GCCGCCAGAC CGACTTCATC CATGCGTGCG CGCGCTCGGG CAAGCCCGTC AACATCAAGA AGGGCCAGTT CCTCGCACCG CACGACATGA AGAACGTGAT CGACAAGGCG CGCGAAGCGG CGCGTGAAGC CGGTCTGTCG GAAGACCGCT TCATGGCGTG CGAGCGCGGC GTCTCGTTCG GCTACAACAA CCTCGTGTCC GACATGCGTT CGCTCGCGAT CATGCGCGAG ACGAGCGCGC CGGTCGTGTT CGACGCGACC CACTCGGTGC AGCTGCCGGG CGGGCAGGGC ACGAGCTCGG GTGGCCAGCG CGAATTCGTG CCGGTGCTCG CGCGTGCCGC GGTCGCGACG GGCGTCGCGG GCCTGTTCAT GGAAACGCAC CCGAATCCGG CCGAAGCGAA GTCGGATGGC CCGAACGCGG TGCCGCTGAA CCGGATGGGC GCGTTGCTGG AGACCCTCGT CACGCTCGAC CAGGCGGTGA AGCGCCATCC GTTCCTGGAA AACGATTTCA ACTAA
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Protein sequence | MKLYDFEVGL DQPFFLIAGT CVVESEQMTI DTAGRLKEIC AKLNVPFIYK SSYDKANRSS GKSFRGLGMD EGLRILGEVK RQLGLPVLTD VHSIDEIEQV ASVVDVLQTP AFLCRQTDFI HACARSGKPV NIKKGQFLAP HDMKNVIDKA REAAREAGLS EDRFMACERG VSFGYNNLVS DMRSLAIMRE TSAPVVFDAT HSVQLPGGQG TSSGGQREFV PVLARAAVAT GVAGLFMETH PNPAEAKSDG PNAVPLNRMG ALLETLVTLD QAVKRHPFLE NDFN
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