Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1994 |
Symbol | |
ID | 6178767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2223473 |
End bp | 2224366 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681760 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001808691 |
Protein GI | 172061039 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.442786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0329645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACGACG TCATCATCAT CGGCGGCAGC TTTGCCGGCC TGGCCGCCGC CCTGCAGCTC GGCCGTGCCC GCCGCAAGGT CACCGTTCTC GATACCGGCC GGCCGCGCAA TCGCTTTGCC GGCCACTCGC ATGGCCTGCT CGGCCACGAT CACAAGCCGC CACTCGACAT CCTGGTCGAG GCGCGCCAGC AGCTGGCGCG CTATCCAACA ATCAGGCTGG TCGATGCCCG GGCCGAGAGC GTGTCTGGCG CCATCGACGA TTTCTGCGTC GTCACGGACG ATAACGAAAG CCTAAGGGCT CGCCGCCTGA TCCTGAGCTA TGGCGTCGCC GACCAGATGC CGGATGTTCC GGGCTTTGCC GAAAGCTGGG GCACGTCCAT CGTGCCCTGC CCGTATTGCG ACGGCTTTGA AGTCGCCGGC CTGCATTGGG GCCTTGTCTG GTCCAGCCCG CAGTCGTACC AGTCTGCCAA GTTGTTCCGC GATTGGACTG ACAAGTTGAC TGTCTTCGCC GATGGGCATG ACATTGCGCC CGATATCCAG GCCGATCTGG CGCGCCGCAA CATACCTGTC GTCGATGGCC GGATCATCGA GGTCGCCCAC CAGAAAGGCC ATATCACCAC CGTCAATCTC GATACCGGTC GCAACGTGGC GGTCGACGTC CTGTTCGCCA ATCCGCGCAA CAAGCCGTCG GCAAGCCTGC ATGAATCACT GGGTCTCGCC ACGGTGGATA CGCCCACCGG CATCGTTTTC AAGGTTGACG AGCGCCGCCA AACCAGCATG CCCGGCATCT ACGCCGCTGG CGACCTCGCC ACGCCCTTCT TGCCATCCGT TACCCAGGCA TCCTCGCAGG GCGCGATGGC GGGCATCTTC GCCCAGCAGT CGATGGTGGT TTGA
|
Protein sequence | MYDVIIIGGS FAGLAAALQL GRARRKVTVL DTGRPRNRFA GHSHGLLGHD HKPPLDILVE ARQQLARYPT IRLVDARAES VSGAIDDFCV VTDDNESLRA RRLILSYGVA DQMPDVPGFA ESWGTSIVPC PYCDGFEVAG LHWGLVWSSP QSYQSAKLFR DWTDKLTVFA DGHDIAPDIQ ADLARRNIPV VDGRIIEVAH QKGHITTVNL DTGRNVAVDV LFANPRNKPS ASLHESLGLA TVDTPTGIVF KVDERRQTSM PGIYAAGDLA TPFLPSVTQA SSQGAMAGIF AQQSMVV
|
| |