Gene BamMC406_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1905 
Symbol 
ID6178654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2120240 
End bp2121055 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content64% 
IMG OID641681664 
Producthypothetical protein 
Protein accessionYP_001808603 
Protein GI172060951 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.617722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCTA CCGTTTTCAT CGTCTCCGAC GGCACCGGGA TCACTGCCGA AACCTTCGCG 
CATTCGATCC TCTCCCAGTT CGACCAGAAA TTCCGTCTCG TGCGCCTGCC GTTCGTCGAC
TCGCTCGAGA AGGCCTATGC GACCGTCGAG AAGATCAACG ACGCCGCCGT GCACGACGGC
CGCCGCGCGA TCGTCTTCAC GACGCTCGTC GACAGCGAGT CGAACGATAT CGTCAAGCGC
TCGAACGCGC TCGTGCTGGA CATGTTCCAG CGCTTCGTCG AGCCGCTCGA GCAGGAACTG
GAGCTGAAGT CGAGCCACGC GATGGGCCGC GGCCACCAGA ACGCCGATAC CGAGGAATAC
AAGACGCGGA TCGAGGCGAT CAACTTCTCG CTCGCGCACG ACGACGGCCA GTCGAACCGC
AACCTGTCCG AAGCCGACGT GATCCTGGTC GGCGTGTCGC GCAGCGGCAA GACGCCGACG
AGCCTGTATC TCGCGATGCA GTACGGCGTG AAGGCGGCCA ACTATCCGCT GATTCCGGAA
GACTTCGAGC GCGGCAAGCT GCCGTCGGCA CTGACGCCGC ATCGCGACAA GCTGTTCGGG
CTGTCGATCG ACCCGCAGCG CCTGTCGGAG ATCCGCAACG AACGCCGCCC CGGCAGCAAG
TACGCAGCGC CGGAGAACTG CCGCTACGAG ATCAACGAGG CCGAGGCGAT GATGCGCCGC
GAAGGGATCA AGTGGCTGTC GTCGACGCAC AAGTCGATCG AGGAGATCGC GACGACGATC
CTGCAGGAAA TCCGTCTCGA CCGGCAGTCG TACTGA
 
Protein sequence
MLPTVFIVSD GTGITAETFA HSILSQFDQK FRLVRLPFVD SLEKAYATVE KINDAAVHDG 
RRAIVFTTLV DSESNDIVKR SNALVLDMFQ RFVEPLEQEL ELKSSHAMGR GHQNADTEEY
KTRIEAINFS LAHDDGQSNR NLSEADVILV GVSRSGKTPT SLYLAMQYGV KAANYPLIPE
DFERGKLPSA LTPHRDKLFG LSIDPQRLSE IRNERRPGSK YAAPENCRYE INEAEAMMRR
EGIKWLSSTH KSIEEIATTI LQEIRLDRQS Y