Gene BamMC406_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1876 
Symbol 
ID6176711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2091064 
End bp2092077 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content67% 
IMG OID641681635 
Productallantoicase 
Protein accessionYP_001808574 
Protein GI172060922 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4266] Allantoicase 
TIGRFAM ID[TIGR02961] allantoicase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.667162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0784409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTC CGCTTCTCGA TCCCGACGCA CCCGATTTCA CGCGGCGCTA CGTGAACCTT 
GCCGACCCGC GTCTCGGTGC GCAGGCGCTC GAGGCCAGCG ACGACTTCTT CGCGCCGAAG
GAGCGGATGC TGAACCCCGA GCCGGCGGTG TTCATCCCCG GCAAGTACGA CGATCACGGC
AAGTGGATGG ACGGCTGGGA GACGCGCCGC AAGCGCACGA CGGGCTATGA CTGGTGCATC
GTCAAGCTCG CGCGGCCGGG CGTGATCAAG GGTGTCGACA TCGACACGAG CCACTTCACC
GGCAACTTCC CGCCGGCCGC GTCGATCGAG GCCGCGTACG TGGCCGACGG CGCGCCGACG
CATGCGACCG AGTGGTGCGA GATCGTGCCG TCGACGACGC TGCAGGGCAA CAGCCATCAC
TACGTCGAAG CGAGCGACGC GCGTGCGTTC ACGCACCTGC GCGTGAACAT CTATCCGGAC
GGCGGCGTCG CGCGCCTGCG CGTGTACGGC CAGCCGCAGC TCGACTGGGC CGGCGCGAGC
GCGACCGAGC AGTTCGACCT CGCGGCGATG GAAAACGGCG GCTACGTGGT GGCGGCGAAC
AACCAGCACT TCGGCGTCGC GTCGAACCTG CTGCTGCCGG GCCGCGGCGT GAACATGGGC
GACGGCTGGG AAACCCGGCG CCGCCGCGAA CCGGGCAACG ACTGGGCGAT CATCGCGCTC
GCGCAGCCGG GCGTGATCCG CAAGATCGAA GTCGATACCG CGTTCTTCAA GGGCAACTAT
CCGGACCGCT GCTCGATCCA GGCCGCGTAC GTGTCGGGCG GCACCGACAG CTCGCTGATC
ACGCAGTCGA TGTTCTGGCC GGTGCTGCTC GGCGAACAGA AGCTGCAGAT GGACAAGCAG
CATTATTTCG AACACGAAAT CGCGTCGCTG GGCCCGGTGA CGCACGTCCG CCTGAACATC
ATTCCGGACG GCGGCGTATC GCGCGTGCGT CTGTGGGGGA CGCTCGACAA ATGA
 
Protein sequence
MAVPLLDPDA PDFTRRYVNL ADPRLGAQAL EASDDFFAPK ERMLNPEPAV FIPGKYDDHG 
KWMDGWETRR KRTTGYDWCI VKLARPGVIK GVDIDTSHFT GNFPPAASIE AAYVADGAPT
HATEWCEIVP STTLQGNSHH YVEASDARAF THLRVNIYPD GGVARLRVYG QPQLDWAGAS
ATEQFDLAAM ENGGYVVAAN NQHFGVASNL LLPGRGVNMG DGWETRRRRE PGNDWAIIAL
AQPGVIRKIE VDTAFFKGNY PDRCSIQAAY VSGGTDSSLI TQSMFWPVLL GEQKLQMDKQ
HYFEHEIASL GPVTHVRLNI IPDGGVSRVR LWGTLDK