Gene BamMC406_1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1844 
Symbol 
ID6179062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2058472 
End bp2058921 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content67% 
IMG OID641681603 
ProductMarR family transcriptional regulator 
Protein accessionYP_001808543 
Protein GI172060891 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.851332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00903999 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGGCC GTCAAGCCGG GCTCGATCAG TTTCTGACCT ATCGCCTCCA TGCGCTCACG 
AAGCGATCCG ACCGCGGGAT CGCCGACGTG TACCGGCACA AGCTCGACAT CTCGCTGCCA
GAGGCGCGCG TGATCGCCGC CGTCGGCGCG TTCGGTCCGT TCTCGATCAT GGATCTCGCA
CGTCATACCA ATCTCGACAA GAGCCAGGCG AGCCGCGCGG CGGAAGCGCT GCTGCGCCAG
GGGCTGCTCG AGCGCAGCGC GAGCGAGGAC GACGGCCGGA TCGTGCTGAT CGCGCTGACG
GCCGACGGCC GCGCGCTGCA TCGCCGGATC ATGCCGATCG TGCGCAAGTG GAATGAAGGC
CTGCTCGCAT GCCTGTCCGA CAGCGAGCGC CAGACGTTCG AGCGGCTGCT CGACAAGGTG
GTCGCGCACG CGGTCGACGG CGACGAGTGA
 
Protein sequence
MKGRQAGLDQ FLTYRLHALT KRSDRGIADV YRHKLDISLP EARVIAAVGA FGPFSIMDLA 
RHTNLDKSQA SRAAEALLRQ GLLERSASED DGRIVLIALT ADGRALHRRI MPIVRKWNEG
LLACLSDSER QTFERLLDKV VAHAVDGDE