| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1812 |
|---|
| Symbol | |
|---|
| ID | 6176614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2015542 |
|---|
| End bp | 2016792 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641681571 |
|---|
| Product | transposase mutator type |
|---|
| Protein accession | YP_001808513 |
|---|
| Protein GI | 172060861 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.39638 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGCA AACCGAAAAC CCCACCGGTA GAGCTACCGG CGATTCCCGC TGAACTGCTT
GAACAATTCG GCAACGGCCC GATGACGGCC GAAGCGATCA ATGCCGCGAC GCTAGCCCTC
AAGAAGGCGC TGATCGAGCG AGCGCTGGGC GGTGAGATGA ATCACCACCT CGGCTACGCG
CCGGGCGCGG CAAAACCGGC CAGCGTGACG AACCAGCGCA ACGGCCGTGG CGCCAAGACG
GTTCTGACCG AAGACGGACC GATCCGCATC GAAGTACCGC GCGACCGCGA CGGCAGTTTC
GAACCACTGC TGATCCCCAA ACACGAACGA CGCTTCACGG GCTTCGACGA CAAGATCGTT
GCGATGTACG CACGGGGCAT GACCGTGCGC GAGATTCAGG GCTTTGTGCT GGAGCAGTAC
GGCACGGAAG TTTCGCCCGA ATTCATCAGC TCGGTGACCG ATGAGGTCGT GGCCGAAGTG
ACGGCCTGGC GGGCCCGGCC ACTCGAACCG ATGTATCCGG TCGTACTCTT CGACGCGCTG
CGCGTGAAGA TTCGCGAAGA CGCCGTCGTG CGCAACAAGG CCGTCTATCT GGCACTGGGC
ATTCTGCCCG ACGGCACGCG TGACATCCTG GGCCTGTGGA TCGAGAACAC CGAGGGCGCC
AAGTTCTGGA TGAAGGTATT CAATGATCTG AAAACACGCG GCGTGGGCGA CATCCTGATT
GCCGTGACCG ACGGCCTCAA GGGCATGCCC GAAGCACTTG CGGTGGTGTT TCCGGCCACG
ACGCTGCAAA CCTGCATCGT CCACCTGATC CGCAACAGTC TCGATTACGC GAGCTGGAAA
GACCGCAAGT CCCTCGCTGC TGCGATCCGC CCGATCTATA CCGCCCCGAG CGCTGAAGCC
GCGCAGGCCG AGCTGGATGC GTTTGCTGAC GGTCCGTGGG GGCAGAAATT CCCGCCGGTC
AGCACGGCGT GGCGCAACGC CTGGGATCGC GTGATTCCGT TCTTTGCGTT CCCGCCGGGC
GTGCGCAAGG TGATCTACAC GACGAACGCC ATCGAGAACA TCAATTCGCA GCTACGCAAG
ATCATCAAGA CCCGAGGTCA CTTCCCGACC GATGATGCCG CGACGAAACT GATCTGGCTG
GCGCTGCGCA ACATCACTGC CGATTGGGGA CGTGCCGCTC ACGACTGGAA GACAGCGATG
AACCAATTCG CTATCCTCTA CGAGGACCGG TTCGTTCGAC CATCCGTGTG A
|
|---|
| Protein sequence | MPRKPKTPPV ELPAIPAELL EQFGNGPMTA EAINAATLAL KKALIERALG GEMNHHLGYA
PGAAKPASVT NQRNGRGAKT VLTEDGPIRI EVPRDRDGSF EPLLIPKHER RFTGFDDKIV
AMYARGMTVR EIQGFVLEQY GTEVSPEFIS SVTDEVVAEV TAWRARPLEP MYPVVLFDAL
RVKIREDAVV RNKAVYLALG ILPDGTRDIL GLWIENTEGA KFWMKVFNDL KTRGVGDILI
AVTDGLKGMP EALAVVFPAT TLQTCIVHLI RNSLDYASWK DRKSLAAAIR PIYTAPSAEA
AQAELDAFAD GPWGQKFPPV STAWRNAWDR VIPFFAFPPG VRKVIYTTNA IENINSQLRK
IIKTRGHFPT DDAATKLIWL ALRNITADWG RAAHDWKTAM NQFAILYEDR FVRPSV
|
|---|
| |