| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1781 |
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| Symbol | rpsR |
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| ID | 6177014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1989145 |
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| End bp | 1989420 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641681540 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001808482 |
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| Protein GI | 172060830 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.708911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.881884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCGCC CGACTGGTAA GAAATTCGAC AAGCGTCGTC AGCAACAAAA CCCGCTCTTC
AAGCGCAAGA AGTTCTGCCG TTTCACGGCA GCCGGCGTCG ACCAGATCGA CTACAAGGAC
ACGGAAACGC TGAAGGACTT CATCGGCGAA AACGGCAAGA TCACGCCGGC TCGTCTGACG
GGTACGAAGG CGCACTATCA GCGTCAGCTG GATACGGCCA TCAAGCGTGC GCGTTTCCTC
GCGCTGCTGC CGTACACCGA TCAGCACAAG GCGTAA
|
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| Protein sequence | MPRPTGKKFD KRRQQQNPLF KRKKFCRFTA AGVDQIDYKD TETLKDFIGE NGKITPARLT
GTKAHYQRQL DTAIKRARFL ALLPYTDQHK A
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