Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1757 |
Symbol | |
ID | 6176078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1962591 |
End bp | 1965188 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681516 |
Product | ATP-dependent chaperone ClpB |
Protein accession | YP_001808458 |
Protein GI | 172060806 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.786862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0714253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAATCG ACAAGCTCAC CACCAAGTTC CAGGAAGCAC TGGCAGACGC GCAAAGCCTC GCGGCAGGCC GCGACAATCA ATACATCGAA CCGGTTCACG TGCTGGCGGC GCTGGTCGCG CAGCACGACG GCTCCGCCCG CTCGCTGATG TCGCGCGCCG GCGTTCATGT GCAGGCGCTG CAAGGCGCGC TGAATGAGGC CATTTCGCGC CTGCCGCAAG TGACGGGCAC GGGCGGCGAC ATCCAGATCG GCCGTGAGTT GGCCGGGCTG CTGAACCAGG CCGACAAGGA AGCGCAGAAG CTCAACGACA CGTTCATCGC GAGCGAGATG TTCCTGCTCG CCGTGTCCGA CGACAAGGGC GAAGCCGGCA AGCTCGCGCG CCAGCACGGC CTGTCGCGCA AGTCGCTCGA AGCCGCGATC GCCGCGGTGC GCGGCGGCTC GCAGGTGCAC AGCCAGGACG CCGAAAGCCA GCGCGAGGCG CTGAAGAAAT ACACGGTCGA CCTGACCGAG CGCGCCCGTG CGGGCAAGCT CGACCCGGTG ATCGGCCGCG ACGACGAAAT CCGCCGCTCG ATCCAGATCC TGCAGCGCCG CACCAAGAAC AACCCGGTGC TGATCGGCGA GCCGGGCGTT GGCAAGACCG CGATCGTCGA AGGGCTCGCG CAGCGGATCG TCAACGGCGA AGTGCCCGAG ACGCTGAAGG GCAAGCGCGT GCTGTCGCTC GACATGGCCG CGCTGCTCGC CGGCGCGAAG TATCGCGGCG AGTTCGAGGA GCGCCTGAAG GCCGTGCTCA ACGACATCGC GAAGGACGAA GGCCAGACGA TCGTGTTCAT CGACGAGATC CACACGATGG TCGGCGCGGG CAAGGCCGAA GGCGCGATGG ATGCGGGCAA CATGCTGAAG CCGGCGCTGT CGCGCGGCGA GCTGCACTGC ATCGGCGCGA CCACGCTCGA CGAATACCGC AAGTACATCG AGAAGGACGC CGCGCTCGAG CGCCGCTTCC AGAAGGTGCT CGTCGACGAG CCGAGCGTCG AGGCGACGAT CGCGATCCTG CGCGGGCTGC AGGAGAAGTA CGAACTGCAC CACGGCGTCG ACATCACCGA CCCGGCGATC GTCGCCGCGG CCGAGCTGTC GCACCGCTAC ATCACCGACC GTTTCCTGCC GGACAAGGCG ATCGACCTGA TCGACGAGGC TGCGTCGAAG ATCAAGATGG AAATCGATTC GAAGCCCGAA GAGATGGACA AGCTCGATCG TCGTCTGATC CAGCTGAAGA TCGAGCGCGA GGCCGTGAAG AAGGAGCAGG ACGAAGCGTC GCAGAAGCGC CTGCAGCTGA TCGAGGAAGA GATCGACCGT CTCGGCCGCG AATATGCGGA CCTCGAGGAG ATCTGGACCG CCGAGAAGGC CGCCGTGCAG GGCAGCGCGC AGCTCAAGGA AGAGATCGAG AAGGTGCGGG CCGACATCGT GCGCCTGCAG CGTGAAGGCA AGCTGGAGAA GGTCGCCGAA CTGCAGTACG GCAAGCTGCC GCAACTCGAG TCGCAACTGA AGCAGGTCAC GCAGGCCGAA GAGCAGGAGC AGCACAACCC GACGCGTCCG CGTCTGCTGC GCACGCAGGT TGGCGCGGAA GAAATCGCGG AAGTCGTGTC GCGCGCAACC GGGATTCCGG TGTCGCGGAT GATGCAGGGC GAACGCGAGA AGCTGTTGCA CATCGAGGAA AAGCTGCACG AGCGCGTGGT CGGCCAGGAC GAGGCGATCA GCGCGGTCGC GGATGCGATC CGTCGTTCCC GCGCGGGTCT CGCCGATCCG AATCGTCCGT ACGGCTCGTT CCTGTTCCTC GGCCCGACGG GTGTCGGCAA GACCGAGCTG TGCAAGGCGC TGGCGTCGTT CCTGTTCGAT TCGGAAGAGC ACCTGATCCG TATCGACATG AGCGAGTTCA TGGAGAAGCA CAGCGTCGCG CGGCTGATCG GCGCGCCGCC GGGCTATGTC GGCTACGAGG AAGGCGGCTA CCTGACGGAA GCCGTGCGCC GCAAGCCGTA CAGCGTGATC CTGCTCGACG AGATCGAGAA GGCGCATCCG GACGTGTTCA ACGTGCTGCT GCAGGTGCTC GACGACGGTC GCATGACCGA CGGGCAGGGG CGTACGGTCG ACTTCAAGAA CACGGTGATC GTGATGACGT CGAACCTCGG CTCGCAGGTG ATCCAGGCGA TGACGGGCGC GCCGCAGGAA GAGATCAAGG ACGCCGTGTG GATCGAGGTG AAGCAGCACT TCCGTCCGGA GTTCCTGAAC CGGATCGACG ACGTCGTCGT GTTCCATGCG CTCGATCGCA GCAACATCGA ATCGATCGCG AAGATCCAGC TCGCACGCCT GCACGACCGG CTCGCGAAGC TCGACATGGC GCTCGACGTG TCGCCGGCGG CGCTCGAACA GATCGCGAAG GTCGGCTACG ATCCGGTGTT CGGCGCGCGG CCGCTGAAGC GCGCGATCCA GCAGGAGATC GAGAACCCGG TCGCGAAGCT GATTCTCGCG GGCCGCTTCG GCCCGAAGGA CGTGATCCCG GTCGACGTCC ACGACGGCGA GTTCATGTTC GACCGCGTCG TGCACTGA
|
Protein sequence | MRIDKLTTKF QEALADAQSL AAGRDNQYIE PVHVLAALVA QHDGSARSLM SRAGVHVQAL QGALNEAISR LPQVTGTGGD IQIGRELAGL LNQADKEAQK LNDTFIASEM FLLAVSDDKG EAGKLARQHG LSRKSLEAAI AAVRGGSQVH SQDAESQREA LKKYTVDLTE RARAGKLDPV IGRDDEIRRS IQILQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE TLKGKRVLSL DMAALLAGAK YRGEFEERLK AVLNDIAKDE GQTIVFIDEI HTMVGAGKAE GAMDAGNMLK PALSRGELHC IGATTLDEYR KYIEKDAALE RRFQKVLVDE PSVEATIAIL RGLQEKYELH HGVDITDPAI VAAAELSHRY ITDRFLPDKA IDLIDEAASK IKMEIDSKPE EMDKLDRRLI QLKIEREAVK KEQDEASQKR LQLIEEEIDR LGREYADLEE IWTAEKAAVQ GSAQLKEEIE KVRADIVRLQ REGKLEKVAE LQYGKLPQLE SQLKQVTQAE EQEQHNPTRP RLLRTQVGAE EIAEVVSRAT GIPVSRMMQG EREKLLHIEE KLHERVVGQD EAISAVADAI RRSRAGLADP NRPYGSFLFL GPTGVGKTEL CKALASFLFD SEEHLIRIDM SEFMEKHSVA RLIGAPPGYV GYEEGGYLTE AVRRKPYSVI LLDEIEKAHP DVFNVLLQVL DDGRMTDGQG RTVDFKNTVI VMTSNLGSQV IQAMTGAPQE EIKDAVWIEV KQHFRPEFLN RIDDVVVFHA LDRSNIESIA KIQLARLHDR LAKLDMALDV SPAALEQIAK VGYDPVFGAR PLKRAIQQEI ENPVAKLILA GRFGPKDVIP VDVHDGEFMF DRVVH
|
| |