Gene BamMC406_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1710 
Symbol 
ID6177393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1911447 
End bp1913360 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content64% 
IMG OID641681469 
ProductK potassium transporter 
Protein accessionYP_001808411 
Protein GI172060759 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00353606 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.989137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CGATCCAGGC GACCGACGCA GCCCATGCGC ATTCGACGCA CCAACACTCG 
ATGCGGGCGC TTGCGATAGC GGCCATCGGC GTGGTGTTCG GCGACATCGG CACGAGCCCG
CTGTATGCGC TGAAGGAGGC GTTCAGCCCC GCACACGGCA TCCCGCTGAC CGAAAGCTCG
ATCCTGGGGG TGATCTCGCT GCTGTTCTGG GCGATCATCC TCGTGGTCGG TATCAAATAT
CTGCTGTTCG TGATGCGGGC CGACAACAAC GGCGAGGGCG GCGTGCTCGC GCTGATGGCC
CTGTCGCTGC GGCCGCTCGA CTCGAAAACC CGCGTCGCGG GCGCGCTGAT GGCGCTCGGG
ATATTCGGCG CGTGCATGTT CTACGGGGAT GCGGTGATCA CGCCGGCGAT CTCGGTGATG
TCGGCGGTCG AAGGTCTCGA AATCGCGACG CCGCACCTAT CCCACCTTGT GCTGCCGATC
ACGATCGTGA TCCTGATCGC GCTGTTCTGG ATCCAGCGCC ACGGCACCGC ATTGGTCGGC
AAGCTGTTCG GCCCGATCAT GGTCGTGTGG TTCGTCGTGA TCGCGGCACT CGGCGTGTAC
CACATCGCGC GCGTGCCGGG CATCATCGCG GCGATCAATC CGTACTACGC AGCATCGTTC
ATGGCCGACC ACCTGCTGCA GGCCTATGTC GTGCTGGGTT CGGTCGTGCT GGTGCTGACC
GGTGCGGAAG CGCTCTACGC GGACATGGGC CACTTTGGCG CGAAGCCGAT CCGCCTCGCC
GCGTACGGGC TCGTGATGCC GTCGCTCGTG CTGAACTACT TCGGCCAGGG CGCGCTGTTG
ATCCAGAACC CGAAAGCGAT CGAAAACCCG TTCTTCCTGC TGGCGCCCGA GTGGGCATTG
CTGCCGCTCG TCGTGCTGTC GACGGTCGCG ACCGTGATCG CGTCGCAGGC CGTGATTTCG
GGCGCGTATT CGCTGACGTC GCAGGCGATC CAGCTCGGTT ATGTGCCGCG CATGAAGGTG
CTGCATACGT CCGAGCTGGC GATCGGCCAG ATCTACGTGC CGGTCGTGAA CTGGCTGCTG
CTGTTCGTGA TCCTCTGCAT CGTGATCGGC TTCAAGAGTT CCGACAACCT GGCGGCGGCG
TACGGTATCG CGGTGACCGC GACGATGGTC ATCACCACCG TGCTGGCGTG CGTCGTGATG
GTGAAGGTGT GGAACTGGAA CCGGCTGCTC GTCGGCGCGA TCATCGCGAT ATTCCTCGCG
ATCGACCTCG GCTTCTTCGG CGCGAACCTG CTGAAGGTCG CGCAGGGCGG CTGGCTGCCG
CTCGGCATCG GCGCGCTGCT GTTCTTCCTG CTGATGACCT GGTACAAGGG CCGCCACATC
GTCAAGGAGC GCACGGCCGC GGACGGTATC CCGCTCGAGC CGTTCCTGCA AGGGCTGCTC
GCGCATCCGC CGCACCGCGT GTCGGGCACC GCGATCTACC TGACCGGCAA CGACAAGCTC
GTGCCCGTCA GCCTGCTGCA CAACCTGAAG CACAACAAGG TGCTCCACGA GCGGACCATC
TTCCTGACGT TCGTCACGCG CGACATTCCG TACGTGCGCG ACGACACACG CCTGAGTTCA
CGCGATGCGG GTGGCGGCCT GTACATCGTC AAGGCCCAGT ACGGCTTCAA CGAGACGCCG
GACGTGAAGG CCGTGCTTGA GGAATTCGGC CGCTCGCACG ACATGACGTT CGAGCTGATG
GACACGTCGT TCTTCCTCGC GCGCGAAACG GTCGTGCCGA CGCATCTGCC CGGCATGTCG
ATCTGGCGCG AGCGCGTGTT TGCGTGGATG CATCAGAACG CCGCGAAGCC GACCGACTTC
TTCTCGATCC CGGCGAATCG CGTCGTCGAG CTCGGCACCA AGATCGAGAT CTGA
 
Protein sequence
MNDTIQATDA AHAHSTHQHS MRALAIAAIG VVFGDIGTSP LYALKEAFSP AHGIPLTESS 
ILGVISLLFW AIILVVGIKY LLFVMRADNN GEGGVLALMA LSLRPLDSKT RVAGALMALG
IFGACMFYGD AVITPAISVM SAVEGLEIAT PHLSHLVLPI TIVILIALFW IQRHGTALVG
KLFGPIMVVW FVVIAALGVY HIARVPGIIA AINPYYAASF MADHLLQAYV VLGSVVLVLT
GAEALYADMG HFGAKPIRLA AYGLVMPSLV LNYFGQGALL IQNPKAIENP FFLLAPEWAL
LPLVVLSTVA TVIASQAVIS GAYSLTSQAI QLGYVPRMKV LHTSELAIGQ IYVPVVNWLL
LFVILCIVIG FKSSDNLAAA YGIAVTATMV ITTVLACVVM VKVWNWNRLL VGAIIAIFLA
IDLGFFGANL LKVAQGGWLP LGIGALLFFL LMTWYKGRHI VKERTAADGI PLEPFLQGLL
AHPPHRVSGT AIYLTGNDKL VPVSLLHNLK HNKVLHERTI FLTFVTRDIP YVRDDTRLSS
RDAGGGLYIV KAQYGFNETP DVKAVLEEFG RSHDMTFELM DTSFFLARET VVPTHLPGMS
IWRERVFAWM HQNAAKPTDF FSIPANRVVE LGTKIEI