| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1676 |
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| Symbol | |
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| ID | 6176576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1874587 |
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| End bp | 1875777 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681436 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001808378 |
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| Protein GI | 172060726 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0582286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC GCACTTCCTT TCCGCCGCTC CAGATTCGCG GCCGCTCGTT GCTGCCCGTG
GTGCAGGGCG GCATGGGCGT CGGCATTTCC GCGCACCGCC TCGCCGGCAG CGTCGCGCGC
GAAGGCGCGC TCGGCACGAT CGCCAGCATC GACCTGCGTC ACCACCATGC GGACCTGCTC
GCGCGCTGCC GCGCGAACCC CGACCGCGCG ACGCTCGAAG CCGCGAACCT CGACGCGCTC
GCACGCGAGA TTCGCCTCGC GAAAACCTAC AGCGAAGGGC GCGGGATGAT CGCGGTCAAC
GTGATGAAGG CGGTGAGCGC GCATGCGGAC TACGTGCGCG TCGCGTGCGA CGAAGGCGCG
GACGCGATCG TGATGGGGGC CGGCCTGCCG CTCGATCTGC CCGACCTCAC GCAGGGGCAC
GACATCGCGC TGATCCCGAT CCTGTCGGAC AGCCGCGGCA TCGCGCTGGT GCTGAAGAAG
TGGATGAAGA AGGGGCGGCT GCCCGATGCG ATCGTGATCG AGCATCCCGC GCATGCGGGC
GGCCACCTCG GCGTCACGCA GATCGACGAC ATGCACGATG CGCGCTTCGA TTTCGCGCGC
GTGCTCGACG AGACCGCACA GGTGATGGCA TCGCTCGGCC TCGCGCGCGA GGCGATCCCG
CTGATCGTCG CGGGCGGGAT CAACAGTCAC GACACGGTGC GTGCGGCGCT GGCGGCCGGC
GCGAACGGCG TGCAGGTGGG CACCCCGTTC GCGGTGACGG AGGAGGGCGA CGCGCATCCG
AACTTCAAGC GCGTGCTGGC CGATGCGCTG CCCGATGACA TCGTCGAATT CGTCAGCGTG
ACGGGACTGC CGGCGCGCGC GGTGAAGACG CCCTGGCTCG ATCGCTACCT GCGCAACGAA
ACGCGGATTC GCGACAAGCT CGGCGCGTTC CGGCAGCGCT GCCCGACCGC GCTCGAATGC
CTGAGCGTCT GCGGGCTGCG CGACGGCATC GAGAAGTTCG GCCATTTCTG CATCGACACG
CGGCTCGCGG CCGCGCTGCG CGGCGACGTC GCGAACGGCC TGTTCTTCCG CGGCCGCGAA
GCGCTGCCGT TCGGCAACGC GATCCGCAGC GTGCGCGATC TGCTCGATCT GCTGCTGACG
GGGCGCGCAG CGGAGCCTGC GACAAACCGT CCGAGGTTTA CGCTGGCTTG A
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| Protein sequence | MTARTSFPPL QIRGRSLLPV VQGGMGVGIS AHRLAGSVAR EGALGTIASI DLRHHHADLL
ARCRANPDRA TLEAANLDAL AREIRLAKTY SEGRGMIAVN VMKAVSAHAD YVRVACDEGA
DAIVMGAGLP LDLPDLTQGH DIALIPILSD SRGIALVLKK WMKKGRLPDA IVIEHPAHAG
GHLGVTQIDD MHDARFDFAR VLDETAQVMA SLGLAREAIP LIVAGGINSH DTVRAALAAG
ANGVQVGTPF AVTEEGDAHP NFKRVLADAL PDDIVEFVSV TGLPARAVKT PWLDRYLRNE
TRIRDKLGAF RQRCPTALEC LSVCGLRDGI EKFGHFCIDT RLAAALRGDV ANGLFFRGRE
ALPFGNAIRS VRDLLDLLLT GRAAEPATNR PRFTLA
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