| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1647 |
|---|
| Symbol | |
|---|
| ID | 6176995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1843388 |
|---|
| End bp | 1843924 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641681408 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001808350 |
|---|
| Protein GI | 172060698 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.349986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.491774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TCTCGCTCAC CCTCGCGATG CTCGCCGTTG CAGCAGGCGC ATTCGCGCAA
ACGCCGCCGC AACCGCAAAC GCCCGCCTCG GCAGCGGCCG CGTCCGCGCC GAGCGCCGAA
CAGCGCGCGG CCCGCCACGA AGCGCGCATC GAGCAGCGCA TCAAGTACCT GCACGATCAG
CTGAAGATCA CGTCGGCGCA GGAGTCGCAA TGGAAGACGT TCGCCGACAC GATGCGCGAG
AACGGTGAAA CGATGGGTCA CCTGTATCGC GCACGGATGG AAAACCACAA CGTGTCCGCG
GTCGACGACA TGAAGCAGTA CGCGGAGCTC GCGCAGGCGA ACGCGGACGG CGCGAAGAAG
CTCGCCGACG CATTCGCGCC GCTGTACCAG AGCTTCCCGG CCGAACAGAA GGCGCTGGCC
GACACGACGT TCCGCAGCTG GCTGCACCAT GGCGGCGAAC GCCGCGGCTC GGGCAAGGCC
AAAAAGGAAG GCAAGGCAGC CGCCGCGCCG GCCGCCAGCG CGCCCGCGCA ACCCTGA
|
|---|
| Protein sequence | MKKISLTLAM LAVAAGAFAQ TPPQPQTPAS AAAASAPSAE QRAARHEARI EQRIKYLHDQ
LKITSAQESQ WKTFADTMRE NGETMGHLYR ARMENHNVSA VDDMKQYAEL AQANADGAKK
LADAFAPLYQ SFPAEQKALA DTTFRSWLHH GGERRGSGKA KKEGKAAAAP AASAPAQP
|
|---|
| |