| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1638 |
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| Symbol | |
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| ID | 6176698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1835885 |
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| End bp | 1836592 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681399 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001808341 |
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| Protein GI | 172060689 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGT CCAAAGTCAT CATCGTCACC GGCGCATCGC AAGGCATCGG TGCCGAAACG
GTCAACGCAT TCCGCGCCCA GGGTCATCGG GTGGTCGCGA CGTCCCGTTC GATCGGGCCG
TCGGACGATC CCGATCTCGT CACGGTCGCG GGCGACATCG GCGATCCGGC GGTCGCGCGG
CGCGTAGTCG ACACCGCAAT CGAGCGCTTC GGTCGGGTCG ACACGCTCGT CAACAACGCC
GGCGTGTTCA TCGCGAAGCC GTTCACCCAA TACACGGCGG ACGACTATGC GGCCATCACC
CGCGTGAACC TGGACGGCTT CTTCCACGTC ACGCAGCGCG CGATCGCGGC GATGCAGCGG
CACGGCGGCG GACACGTGGT CAGCATCACG ACGAGCCTCG TCGACCACGC GAACAGCAAC
GTGCCGTCGG CACTCGCATC GCTGACGAAA GGCGGGCTCA ATGCGGCGAC GAAGTCGCTC
GCGATCGAGT ATGCGAAGGC CGGCATCCGC GTGAACGCGG TGTCGCCCGG CATCATCAAC
TCGCCGATGC ATGCGCCCGA CACGCATGCA ACGCTCGCAT CGCTGCATCC GGTCGGCCGG
ATGGGCGAGA TGAGCGACAT CGTCGGCGCG ATCCTGTATC TCGATTCGGC CCTGTTCGTC
ACCGGCGAGA TCCTGCACGT GGACGGCGGC CAGAGCGCCG GGCACTGA
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| Protein sequence | MSTSKVIIVT GASQGIGAET VNAFRAQGHR VVATSRSIGP SDDPDLVTVA GDIGDPAVAR
RVVDTAIERF GRVDTLVNNA GVFIAKPFTQ YTADDYAAIT RVNLDGFFHV TQRAIAAMQR
HGGGHVVSIT TSLVDHANSN VPSALASLTK GGLNAATKSL AIEYAKAGIR VNAVSPGIIN
SPMHAPDTHA TLASLHPVGR MGEMSDIVGA ILYLDSALFV TGEILHVDGG QSAGH
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