Gene BamMC406_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1580 
Symbol 
ID6175957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1773540 
End bp1774112 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content69% 
IMG OID641681341 
Producthypothetical protein 
Protein accessionYP_001808283 
Protein GI172060631 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.967848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.206881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCAA CCCAACTTCT TGTTCCGACG TTGACCCAGA TGCTGCGCGC GCAATCCGCG 
TGGCTCGACA AGGCCGTCGC GCACCGGCAG GCCGTCGGCG ACGCGCCCGA TGCGGTGCTG
ACGCTGAAGC TCGCACCCGA CATGTATCCG TTCGCCGCAC AGGTGCGGTT CTCGTGCTTC
CAGGCGATGG AGCCGGTCTA CCGGCTGCGC GGCGAACCGC TGCCGGATGC GCTGCTCGCG
CTGCGCGAAG CCGGCTGGCA CGCCGATGCG CAGCCGGGCA CGGTGAGCGA CGCGCAAGGG
ATCCTCTCCG GCACGATCGC ATTCCTCGGC GAACTCGCGC CCGATGCGCT CGATGGCGGC
GCCGCGCGGC CGATCGCCCT CGAGCTGCCG AACGGCATCG CGTTCGACAT GACGGGCGAG
CAGTACGTGC GCGACTGGGC GCTGCCGCAG TTCTACTTTC ACGCGATCGC CGCGTACGCG
ATCCTGCGCC ATTACGGCGT CGAGCTCGGC AAGGCCGACT ACGTGCCGCA CATGCTGGCG
TACGTGCGGC CCGACACGAT TCCGCAGGGT TGA
 
Protein sequence
MSPTQLLVPT LTQMLRAQSA WLDKAVAHRQ AVGDAPDAVL TLKLAPDMYP FAAQVRFSCF 
QAMEPVYRLR GEPLPDALLA LREAGWHADA QPGTVSDAQG ILSGTIAFLG ELAPDALDGG
AARPIALELP NGIAFDMTGE QYVRDWALPQ FYFHAIAAYA ILRHYGVELG KADYVPHMLA
YVRPDTIPQG