| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1574 |
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| Symbol | |
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| ID | 6177489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1765056 |
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| End bp | 1766114 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681335 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001808277 |
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| Protein GI | 172060625 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3376] High-affinity nickel permease |
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| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.160599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACT CGTTCTTCCG TCTCTTCAAC GACAGTCCGT CAGGGCTGCG CGGCAAAATC
GTCGCGATCT ACTCATTGCT CGTCGCGTTC AACGTCGGCG CGTGGATCTG GGCCTTCGTC
GCGTTTCGCG ACCAGCCCGT GCTGCTGGGC ACCGCGCTGC TCGCCTACGT GTTCGGGCTG
CGCCACGCGG TCGACGCCGA TCATATCGCC GCGATCGACA ACGTCACGCG CAAGCTGATG
CAGGAAGGCC GCAGCCCGCT CGGCGCCGGC CTGTTCTTCT CGCTCGGCCA TTCGACGGTC
GTAATCGTGA TGTCGGTCGC GGTCGCGCTG ACCGCCGCGT CGCTCGCGCG CTTCGAGAGC
ATGAAGGCCT GGGGCGGCGT GATCAGCACC AGCGTGTCCG CGTTCTTCCT GCTGGTACTC
GCGGCCGCAA ACCTGCTGAT CCTGATTTCC GTGTACCGGA CGTTTCGCGC GGCGCGCCGC
GGCGAGCCGA TCGTCGACGC CGATCTCGAC ATGCTGATGA ACCAGCGCGG CGTGCTGGCC
CGGTTGTTCC GGCCGTTGTT CCGCCTCGTG TCGCGCAGCT GGCACCTGTA TCCGGTCGGG
TTCCTGTTCG GCTTCGGCTT CGATACGGCG ACCGAGATCG CGCTGTTCGG CATTTCGGCC
ACGCAAGTCC AGGGCGGCAT GTCGTTCTGG TCGGTGATGG CGCTGCCGGT GCTGTTCACC
GCGGGCATGA CGCTCGTCGA CACGACCGAC GGCATCCTGA TGATGGGCGC GTACCGGTGG
GCGTACGTGC GGCCGATTCG CAAGATCTAC TACAACATGA CGATCACGTT CGTGTCGGTG
CTGGTCGCCG CGCTGATCGG CGGCATCGAG GTGCTCGCGC TGCTCGCGGA CAAACTCTCG
CTGCAGGGCC CCGTATGGAA TTTCTCGACG ATGGTCGCAT CGCATTTCGG GATGCTCGGC
TACGTCGTGA TCGGCCTGTT CCTCGCGTGC TGGATGGTGT CGGCCGCGAT CTATCGCATC
AAACGCTACG ACGAGATCGA CGTGACGCTC TCGGCCTGA
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| Protein sequence | MLDSFFRLFN DSPSGLRGKI VAIYSLLVAF NVGAWIWAFV AFRDQPVLLG TALLAYVFGL
RHAVDADHIA AIDNVTRKLM QEGRSPLGAG LFFSLGHSTV VIVMSVAVAL TAASLARFES
MKAWGGVIST SVSAFFLLVL AAANLLILIS VYRTFRAARR GEPIVDADLD MLMNQRGVLA
RLFRPLFRLV SRSWHLYPVG FLFGFGFDTA TEIALFGISA TQVQGGMSFW SVMALPVLFT
AGMTLVDTTD GILMMGAYRW AYVRPIRKIY YNMTITFVSV LVAALIGGIE VLALLADKLS
LQGPVWNFST MVASHFGMLG YVVIGLFLAC WMVSAAIYRI KRYDEIDVTL SA
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